Protein–RNA interactions for Protein: P11686

SFTPC, Pulmonary surfactant-associated protein C, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPCP11686 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SFTPCP11686 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.24■□□□□ 0.35
SFTPCP11686 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SFTPCP11686 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SFTPCP11686 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.24■□□□□ 0.35
SFTPCP11686 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC17.24■□□□□ 0.35
SFTPCP11686 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SFTPCP11686 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SFTPCP11686 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.24■□□□□ 0.35
SFTPCP11686 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SFTPCP11686 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
SFTPCP11686 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.24■□□□□ 0.35
SFTPCP11686 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SFTPCP11686 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SFTPCP11686 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SFTPCP11686 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.24■□□□□ 0.35
SFTPCP11686 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SFTPCP11686 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.24■□□□□ 0.35
SFTPCP11686 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPCP11686 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPCP11686 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPCP11686 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPCP11686 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPCP11686 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SFTPCP11686 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPCP11686 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPCP11686 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPCP11686 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPCP11686 FEM1AP1-201ENST00000431297 1995 ntBASIC17.23■□□□□ 0.35
SFTPCP11686 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPCP11686 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPCP11686 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPCP11686 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.23■□□□□ 0.35
SFTPCP11686 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SFTPCP11686 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
SFTPCP11686 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.23■□□□□ 0.35
SFTPCP11686 AC099336.1-202ENST00000602961 463 ntBASIC17.23■□□□□ 0.35
SFTPCP11686 AL671883.3-201ENST00000603274 991 ntBASIC17.23■□□□□ 0.35
SFTPCP11686 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.23■□□□□ 0.35
SFTPCP11686 AL157888.1-201ENST00000631930 593 ntBASIC17.23■□□□□ 0.35
SFTPCP11686 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPCP11686 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPCP11686 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPCP11686 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SFTPCP11686 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPCP11686 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPCP11686 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SFTPCP11686 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SFTPCP11686 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPCP11686 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.22■□□□□ 0.35
SFTPCP11686 KRT8P7-201ENST00000533003 1432 ntBASIC17.22■□□□□ 0.35
SFTPCP11686 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPCP11686 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPCP11686 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.22■□□□□ 0.35
SFTPCP11686 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPCP11686 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPCP11686 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPCP11686 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPCP11686 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPCP11686 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPCP11686 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPCP11686 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.22■□□□□ 0.35
SFTPCP11686 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.22■□□□□ 0.35
SFTPCP11686 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.22■□□□□ 0.35
SFTPCP11686 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.22■□□□□ 0.35
SFTPCP11686 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SFTPCP11686 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.22■□□□□ 0.35
SFTPCP11686 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPCP11686 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.22■□□□□ 0.35
SFTPCP11686 AL773604.1-201ENST00000617417 272 ntBASIC17.22■□□□□ 0.35
SFTPCP11686 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.22■□□□□ 0.35
SFTPCP11686 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.22■□□□□ 0.35
SFTPCP11686 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.22■□□□□ 0.35
SFTPCP11686 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPCP11686 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.22■□□□□ 0.35
SFTPCP11686 GPAT2P1-201ENST00000444924 1672 ntBASIC17.22■□□□□ 0.35
SFTPCP11686 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPCP11686 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SFTPCP11686 IL9RP2-201ENST00000423948 1312 ntBASIC17.21■□□□□ 0.35
SFTPCP11686 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SFTPCP11686 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
SFTPCP11686 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPCP11686 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPCP11686 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.21■□□□□ 0.35
SFTPCP11686 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPCP11686 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPCP11686 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPCP11686 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SFTPCP11686 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.21■□□□□ 0.35
SFTPCP11686 FEM1AP4-201ENST00000443167 1987 ntBASIC17.21■□□□□ 0.35
SFTPCP11686 AC036111.1-201ENST00000533973 1582 ntBASIC17.21■□□□□ 0.35
SFTPCP11686 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPCP11686 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPCP11686 AC233702.3-201ENST00000578656 1387 ntBASIC17.21■□□□□ 0.35
SFTPCP11686 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPCP11686 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPCP11686 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SFTPCP11686 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SFTPCP11686 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.21■□□□□ 0.35
SFTPCP11686 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms