Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.47■□□□□ 0.39
THBS1P07996 AC026271.3-201ENST00000571884 352 ntBASIC17.47■□□□□ 0.39
THBS1P07996 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.47■□□□□ 0.39
THBS1P07996 AL359736.2-201ENST00000621992 437 ntBASIC17.47■□□□□ 0.39
THBS1P07996 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.47■□□□□ 0.39
THBS1P07996 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
THBS1P07996 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
THBS1P07996 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
THBS1P07996 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
THBS1P07996 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
THBS1P07996 KRT8P11-201ENST00000409686 1436 ntBASIC17.47■□□□□ 0.39
THBS1P07996 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
THBS1P07996 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
THBS1P07996 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
THBS1P07996 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.46■□□□□ 0.39
THBS1P07996 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.46■□□□□ 0.39
THBS1P07996 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.46■□□□□ 0.39
THBS1P07996 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
THBS1P07996 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
THBS1P07996 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
THBS1P07996 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
THBS1P07996 UBE2SP1-201ENST00000450587 669 ntBASIC17.46■□□□□ 0.39
THBS1P07996 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.46■□□□□ 0.39
THBS1P07996 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
THBS1P07996 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.46■□□□□ 0.39
THBS1P07996 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
THBS1P07996 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
THBS1P07996 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
THBS1P07996 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
THBS1P07996 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.46■□□□□ 0.39
THBS1P07996 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
THBS1P07996 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
THBS1P07996 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
THBS1P07996 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.46■□□□□ 0.39
THBS1P07996 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
THBS1P07996 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
THBS1P07996 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
THBS1P07996 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.46■□□□□ 0.39
THBS1P07996 KRT16P1-201ENST00000399124 1418 ntBASIC17.46■□□□□ 0.39
THBS1P07996 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
THBS1P07996 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
THBS1P07996 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.45■□□□□ 0.38
THBS1P07996 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
THBS1P07996 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THBS1P07996 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
THBS1P07996 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
THBS1P07996 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THBS1P07996 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THBS1P07996 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THBS1P07996 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THBS1P07996 ANO7L1-203ENST00000602586 1720 ntBASIC17.45■□□□□ 0.38
THBS1P07996 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
THBS1P07996 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.45■□□□□ 0.38
THBS1P07996 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THBS1P07996 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THBS1P07996 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
THBS1P07996 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.45■□□□□ 0.38
THBS1P07996 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.45■□□□□ 0.38
THBS1P07996 RPPH1-201ENST00000516869 333 ntBASIC17.45■□□□□ 0.38
THBS1P07996 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.45■□□□□ 0.38
THBS1P07996 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
THBS1P07996 RARRES2P10-201ENST00000564312 460 ntBASIC17.45■□□□□ 0.38
THBS1P07996 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.45■□□□□ 0.38
THBS1P07996 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.45■□□□□ 0.38
THBS1P07996 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.45■□□□□ 0.38
THBS1P07996 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THBS1P07996 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THBS1P07996 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
THBS1P07996 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.45■□□□□ 0.38
THBS1P07996 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS1P07996 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
THBS1P07996 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
THBS1P07996 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS1P07996 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.44■□□□□ 0.38
THBS1P07996 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS1P07996 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS1P07996 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS1P07996 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
THBS1P07996 WIZP1-201ENST00000531444 2299 ntBASIC17.44■□□□□ 0.38
THBS1P07996 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS1P07996 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS1P07996 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS1P07996 AC004951.3-201ENST00000418645 1148 ntBASIC17.44■□□□□ 0.38
THBS1P07996 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
THBS1P07996 AC008550.1-201ENST00000511500 884 ntBASIC17.44■□□□□ 0.38
THBS1P07996 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.44■□□□□ 0.38
THBS1P07996 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS1P07996 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.44■□□□□ 0.38
THBS1P07996 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
THBS1P07996 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
THBS1P07996 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS1P07996 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS1P07996 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
THBS1P07996 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
THBS1P07996 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
THBS1P07996 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
THBS1P07996 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
THBS1P07996 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
THBS1P07996 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
THBS1P07996 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms