Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB2P05538 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB2P05538 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HLA-DQB2P05538 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB2P05538 UNC93B2-201ENST00000285383 730 ntBASIC19.25■□□□□ 0.67
HLA-DQB2P05538 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB2P05538 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.25■□□□□ 0.67
HLA-DQB2P05538 CRYGFP-201ENST00000418459 633 ntBASIC19.25■□□□□ 0.67
HLA-DQB2P05538 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB2P05538 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.25■□□□□ 0.67
HLA-DQB2P05538 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB2P05538 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.25■□□□□ 0.67
HLA-DQB2P05538 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB2P05538 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB2P05538 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB2P05538 KRT17P2-201ENST00000300992 1314 ntBASIC19.25■□□□□ 0.67
HLA-DQB2P05538 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HLA-DQB2P05538 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.24■□□□□ 0.67
HLA-DQB2P05538 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 AL390955.1-201ENST00000428694 934 ntBASIC19.24■□□□□ 0.67
HLA-DQB2P05538 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HLA-DQB2P05538 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 KRT8P3-201ENST00000519669 1449 ntBASIC19.23■□□□□ 0.67
HLA-DQB2P05538 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DQB2P05538 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQB2P05538 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQB2P05538 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.22■□□□□ 0.67
HLA-DQB2P05538 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
HLA-DQB2P05538 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.22■□□□□ 0.67
HLA-DQB2P05538 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQB2P05538 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQB2P05538 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.22■□□□□ 0.67
HLA-DQB2P05538 AP005242.2-201ENST00000580065 1175 ntBASIC19.22■□□□□ 0.67
HLA-DQB2P05538 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.22■□□□□ 0.67
HLA-DQB2P05538 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.22■□□□□ 0.67
HLA-DQB2P05538 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQB2P05538 AC083906.6-201ENST00000641366 219 ntBASIC19.22■□□□□ 0.67
HLA-DQB2P05538 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
HLA-DQB2P05538 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQB2P05538 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.22■□□□□ 0.67
HLA-DQB2P05538 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQB2P05538 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQB2P05538 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQB2P05538 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DQB2P05538 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DQB2P05538 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms