Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGN1P05114 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGN1P05114 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGN1P05114 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGN1P05114 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGN1P05114 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGN1P05114 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGN1P05114 AL354751.1-201ENST00000412768 1863 ntBASIC17.19■□□□□ 0.34
HMGN1P05114 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGN1P05114 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGN1P05114 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGN1P05114 MIR663A-201ENST00000385250 93 ntBASIC17.19■□□□□ 0.34
HMGN1P05114 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGN1P05114 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGN1P05114 TSPY21P-201ENST00000433481 731 ntBASIC17.19■□□□□ 0.34
HMGN1P05114 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGN1P05114 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGN1P05114 HLA-B-256ENST00000639848 1089 ntBASIC17.19■□□□□ 0.34
HMGN1P05114 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGN1P05114 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGN1P05114 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.19■□□□□ 0.34
HMGN1P05114 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGN1P05114 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGN1P05114 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGN1P05114 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGN1P05114 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.19■□□□□ 0.34
HMGN1P05114 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HMGN1P05114 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HMGN1P05114 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HMGN1P05114 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
HMGN1P05114 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
HMGN1P05114 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGN1P05114 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGN1P05114 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGN1P05114 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGN1P05114 AC020916.1-201ENST00000587762 1774 ntBASIC17.18■□□□□ 0.34
HMGN1P05114 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGN1P05114 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGN1P05114 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGN1P05114 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGN1P05114 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
HMGN1P05114 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGN1P05114 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGN1P05114 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGN1P05114 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGN1P05114 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HMGN1P05114 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HMGN1P05114 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGN1P05114 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.18■□□□□ 0.34
HMGN1P05114 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.18■□□□□ 0.34
HMGN1P05114 AL121832.2-201ENST00000610979 668 ntBASIC17.18■□□□□ 0.34
HMGN1P05114 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGN1P05114 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGN1P05114 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGN1P05114 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGN1P05114 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.18■□□□□ 0.34
HMGN1P05114 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.18■□□□□ 0.34
HMGN1P05114 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGN1P05114 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HMGN1P05114 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HMGN1P05114 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.18■□□□□ 0.34
HMGN1P05114 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGN1P05114 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.17■□□□□ 0.34
HMGN1P05114 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.17■□□□□ 0.34
HMGN1P05114 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.17■□□□□ 0.34
HMGN1P05114 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMGN1P05114 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.17■□□□□ 0.34
HMGN1P05114 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGN1P05114 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGN1P05114 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGN1P05114 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HMGN1P05114 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.17■□□□□ 0.34
HMGN1P05114 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGN1P05114 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGN1P05114 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.17■□□□□ 0.34
HMGN1P05114 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGN1P05114 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HMGN1P05114 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGN1P05114 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.17■□□□□ 0.34
HMGN1P05114 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.17■□□□□ 0.34
HMGN1P05114 AC083906.2-201ENST00000511578 360 ntBASIC17.17■□□□□ 0.34
HMGN1P05114 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.17■□□□□ 0.34
HMGN1P05114 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMGN1P05114 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.17■□□□□ 0.34
HMGN1P05114 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.17■□□□□ 0.34
HMGN1P05114 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HMGN1P05114 AC120498.8-201ENST00000614275 531 ntBASIC17.17■□□□□ 0.34
HMGN1P05114 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HMGN1P05114 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HMGN1P05114 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
HMGN1P05114 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.17■□□□□ 0.34
HMGN1P05114 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
HMGN1P05114 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
HMGN1P05114 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGN1P05114 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
HMGN1P05114 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGN1P05114 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGN1P05114 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HMGN1P05114 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.17■□□□□ 0.34
HMGN1P05114 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms