Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
P04436 BCL2-203ENST00000589955 5011 ntBASIC17.33■□□□□ 0.37
P04436 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.33■□□□□ 0.37
P04436 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
P04436 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.33■□□□□ 0.37
P04436 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.33■□□□□ 0.37
P04436 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04436 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.33■□□□□ 0.36
P04436 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.33■□□□□ 0.36
P04436 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.33■□□□□ 0.36
P04436 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
P04436 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
P04436 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04436 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
P04436 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04436 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.33■□□□□ 0.36
P04436 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
P04436 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.33■□□□□ 0.36
P04436 AL590326.2-201ENST00000625139 305 ntBASIC17.33■□□□□ 0.36
P04436 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04436 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.33■□□□□ 0.36
P04436 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04436 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04436 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
P04436 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04436 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
P04436 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
P04436 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.32■□□□□ 0.36
P04436 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
P04436 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04436 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04436 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04436 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.32■□□□□ 0.36
P04436 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.32■□□□□ 0.36
P04436 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.32■□□□□ 0.36
P04436 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
P04436 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04436 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04436 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
P04436 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04436 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04436 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.32■□□□□ 0.36
P04436 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.32■□□□□ 0.36
P04436 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.32■□□□□ 0.36
P04436 AC141257.4-201ENST00000634557 245 ntBASIC17.32■□□□□ 0.36
P04436 AC136944.6-201ENST00000634818 245 ntBASIC17.32■□□□□ 0.36
P04436 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04436 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04436 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04436 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
P04436 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04436 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04436 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
P04436 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
P04436 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
P04436 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.31■□□□□ 0.36
P04436 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04436 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
P04436 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
P04436 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.31■□□□□ 0.36
P04436 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04436 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.31■□□□□ 0.36
P04436 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04436 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.31■□□□□ 0.36
P04436 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04436 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04436 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04436 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
P04436 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
P04436 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04436 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04436 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04436 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04436 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
P04436 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
P04436 AK4P3-201ENST00000418260 669 ntBASIC17.31■□□□□ 0.36
P04436 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
P04436 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
P04436 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
P04436 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
P04436 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.31■□□□□ 0.36
P04436 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.31■□□□□ 0.36
P04436 AL138966.2-201ENST00000621997 464 ntBASIC17.31■□□□□ 0.36
P04436 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
P04436 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04436 TEX21P-204ENST00000641479 1693 ntBASIC17.31■□□□□ 0.36
P04436 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04436 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.31■□□□□ 0.36
P04436 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
P04436 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.31■□□□□ 0.36
P04436 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04436 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
P04436 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04436 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
P04436 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
P04436 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04436 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04436 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04436 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
P04436 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms