Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 HLA-L-209ENST00000420110 1011 ntBASIC17.04■□□□□ 0.32
HLA-DQA2P01906 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 RNA5SP413-201ENST00000516373 109 ntBASIC17.04■□□□□ 0.32
HLA-DQA2P01906 UNC93B5-201ENST00000530315 699 ntBASIC17.04■□□□□ 0.32
HLA-DQA2P01906 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HLA-DQA2P01906 CROCCP1-201ENST00000426910 5675 ntBASIC17.03■□□□□ 0.32
HLA-DQA2P01906 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 FP475955.4-201ENST00000623131 1990 ntBASIC17.03■□□□□ 0.32
HLA-DQA2P01906 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.03■□□□□ 0.32
HLA-DQA2P01906 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 NBPF21P-201ENST00000425093 1451 ntBASIC17.02■□□□□ 0.32
HLA-DQA2P01906 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 AC004264.1-201ENST00000608354 794 ntBASIC17.02■□□□□ 0.32
HLA-DQA2P01906 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HLA-DQA2P01906 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DQA2P01906 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DQA2P01906 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.02■□□□□ 0.31
HLA-DQA2P01906 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
HLA-DQA2P01906 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.02■□□□□ 0.31
HLA-DQA2P01906 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DQA2P01906 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DQA2P01906 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HLA-DQA2P01906 CROCCP3-202ENST00000420820 1947 ntBASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms