Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IFNA1P01562 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
IFNA1P01562 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IFNA1P01562 AC068587.6-202ENST00000641839 5619 ntBASIC15.02■□□□□ -0
IFNA1P01562 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
IFNA1P01562 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC15.02■□□□□ -0
IFNA1P01562 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IFNA1P01562 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IFNA1P01562 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
IFNA1P01562 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.02■□□□□ -0
IFNA1P01562 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IFNA1P01562 TSPY26P-201ENST00000476365 1326 ntBASIC15.02■□□□□ -0
IFNA1P01562 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
IFNA1P01562 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC15.02■□□□□ -0
IFNA1P01562 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
IFNA1P01562 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.02■□□□□ -0
IFNA1P01562 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.02■□□□□ -0
IFNA1P01562 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC15.02■□□□□ -0
IFNA1P01562 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.02■□□□□ -0
IFNA1P01562 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.02■□□□□ -0
IFNA1P01562 FGF8-207ENST00000618991 856 ntTSL 3 BASIC15.02■□□□□ -0
IFNA1P01562 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
IFNA1P01562 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
IFNA1P01562 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
IFNA1P01562 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
IFNA1P01562 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
IFNA1P01562 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC15.02□□□□□ -0.01
IFNA1P01562 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
IFNA1P01562 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
IFNA1P01562 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
IFNA1P01562 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.02□□□□□ -0.01
IFNA1P01562 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.02□□□□□ -0.01
IFNA1P01562 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
IFNA1P01562 FLJ16779-201ENST00000612722 7638 ntBASIC15.01□□□□□ -0.01
IFNA1P01562 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
IFNA1P01562 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
IFNA1P01562 AC073592.3-201ENST00000625118 1834 ntBASIC15.01□□□□□ -0.01
IFNA1P01562 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.01□□□□□ -0.01
IFNA1P01562 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.01□□□□□ -0.01
IFNA1P01562 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 ZNF815P-204ENST00000434898 1737 ntBASIC15.01□□□□□ -0.01
IFNA1P01562 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.01□□□□□ -0.01
IFNA1P01562 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 DUX4L2-201ENST00000561772 1275 ntBASIC15.01□□□□□ -0.01
IFNA1P01562 MIR4767-201ENST00000582827 78 ntBASIC15.01□□□□□ -0.01
IFNA1P01562 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC15.01□□□□□ -0.01
IFNA1P01562 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.01□□□□□ -0.01
IFNA1P01562 DUX4L6-201ENST00000626483 1275 ntBASIC15.01□□□□□ -0.01
IFNA1P01562 DUX4L1-201ENST00000627662 1275 ntBASIC15.01□□□□□ -0.01
IFNA1P01562 DUX4L8-201ENST00000629013 1275 ntBASIC15.01□□□□□ -0.01
IFNA1P01562 DUX4L3-201ENST00000630187 1275 ntBASIC15.01□□□□□ -0.01
IFNA1P01562 DUX4L7-201ENST00000630678 1275 ntBASIC15.01□□□□□ -0.01
IFNA1P01562 DUX4L5-201ENST00000630834 1275 ntBASIC15.01□□□□□ -0.01
IFNA1P01562 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.01□□□□□ -0.01
IFNA1P01562 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.01□□□□□ -0.01
IFNA1P01562 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.01□□□□□ -0.01
IFNA1P01562 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.01□□□□□ -0.01
IFNA1P01562 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
IFNA1P01562 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
IFNA1P01562 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.01□□□□□ -0.01
IFNA1P01562 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
IFNA1P01562 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.01□□□□□ -0.01
IFNA1P01562 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
IFNA1P01562 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
IFNA1P01562 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.01□□□□□ -0.01
IFNA1P01562 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IFNA1P01562 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
IFNA1P01562 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15□□□□□ -0.01
IFNA1P01562 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IFNA1P01562 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
IFNA1P01562 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
IFNA1P01562 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15□□□□□ -0.01
IFNA1P01562 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
IFNA1P01562 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15□□□□□ -0.01
IFNA1P01562 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IFNA1P01562 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
IFNA1P01562 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15□□□□□ -0.01
IFNA1P01562 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15□□□□□ -0.01
IFNA1P01562 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15□□□□□ -0.01
IFNA1P01562 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms