Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
UPK1BO75841 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
UPK1BO75841 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1BO75841 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1BO75841 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1BO75841 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.55■□□□□ 0.24
UPK1BO75841 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1BO75841 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
UPK1BO75841 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1BO75841 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1BO75841 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1BO75841 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1BO75841 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.55■□□□□ 0.24
UPK1BO75841 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.55■□□□□ 0.24
UPK1BO75841 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1BO75841 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1BO75841 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1BO75841 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
UPK1BO75841 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
UPK1BO75841 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.55■□□□□ 0.24
UPK1BO75841 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1BO75841 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1BO75841 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.55■□□□□ 0.24
UPK1BO75841 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1BO75841 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1BO75841 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1BO75841 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1BO75841 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.55■□□□□ 0.24
UPK1BO75841 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1BO75841 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
UPK1BO75841 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
UPK1BO75841 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
UPK1BO75841 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
UPK1BO75841 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.54■□□□□ 0.24
UPK1BO75841 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.54■□□□□ 0.24
UPK1BO75841 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.54■□□□□ 0.24
UPK1BO75841 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.54■□□□□ 0.24
UPK1BO75841 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1BO75841 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
UPK1BO75841 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1BO75841 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1BO75841 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.54■□□□□ 0.24
UPK1BO75841 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1BO75841 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.54■□□□□ 0.24
UPK1BO75841 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.54■□□□□ 0.24
UPK1BO75841 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1BO75841 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1BO75841 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1BO75841 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
UPK1BO75841 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1BO75841 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.54■□□□□ 0.24
UPK1BO75841 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
UPK1BO75841 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.54■□□□□ 0.24
UPK1BO75841 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.54■□□□□ 0.24
UPK1BO75841 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
UPK1BO75841 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1BO75841 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.54■□□□□ 0.24
UPK1BO75841 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1BO75841 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1BO75841 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1BO75841 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1BO75841 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.54■□□□□ 0.24
UPK1BO75841 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.54■□□□□ 0.24
UPK1BO75841 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
UPK1BO75841 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC16.53■□□□□ 0.24
UPK1BO75841 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1BO75841 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1BO75841 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1BO75841 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1BO75841 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.53■□□□□ 0.24
UPK1BO75841 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.53■□□□□ 0.24
UPK1BO75841 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1BO75841 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1BO75841 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1BO75841 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.53■□□□□ 0.24
UPK1BO75841 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1BO75841 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
UPK1BO75841 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC16.53■□□□□ 0.24
UPK1BO75841 MBP-237ENST00000579129 1052 ntTSL 5 BASIC16.53■□□□□ 0.24
UPK1BO75841 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC16.53■□□□□ 0.24
UPK1BO75841 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC16.53■□□□□ 0.24
UPK1BO75841 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
UPK1BO75841 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1BO75841 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.53■□□□□ 0.24
UPK1BO75841 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.53■□□□□ 0.24
UPK1BO75841 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
UPK1BO75841 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
UPK1BO75841 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1BO75841 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1BO75841 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.53■□□□□ 0.24
UPK1BO75841 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.53■□□□□ 0.24
UPK1BO75841 PP12613-201ENST00000424958 2230 ntBASIC16.53■□□□□ 0.24
UPK1BO75841 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
UPK1BO75841 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
UPK1BO75841 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC16.53■□□□□ 0.24
UPK1BO75841 AC087633.2-202ENST00000565166 1439 ntBASIC16.53■□□□□ 0.24
UPK1BO75841 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.53■□□□□ 0.24
UPK1BO75841 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1BO75841 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
UPK1BO75841 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms