Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF11O60813 AL512353.2-201ENST00000448759 1962 ntBASIC19.25■□□□□ 0.67
PRAMEF11O60813 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.25■□□□□ 0.67
PRAMEF11O60813 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
PRAMEF11O60813 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF11O60813 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.25■□□□□ 0.67
PRAMEF11O60813 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF11O60813 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF11O60813 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF11O60813 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.25■□□□□ 0.67
PRAMEF11O60813 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF11O60813 AC012306.2-201ENST00000609350 630 ntBASIC19.25■□□□□ 0.67
PRAMEF11O60813 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF11O60813 AC133561.5-201ENST00000635547 218 ntBASIC19.25■□□□□ 0.67
PRAMEF11O60813 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.25■□□□□ 0.67
PRAMEF11O60813 AC097493.4-201ENST00000641197 219 ntBASIC19.25■□□□□ 0.67
PRAMEF11O60813 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF11O60813 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.25■□□□□ 0.67
PRAMEF11O60813 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF11O60813 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.25■□□□□ 0.67
PRAMEF11O60813 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
PRAMEF11O60813 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF11O60813 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PRAMEF11O60813 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
PRAMEF11O60813 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF11O60813 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF11O60813 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PRAMEF11O60813 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF11O60813 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
PRAMEF11O60813 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF11O60813 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF11O60813 AC211429.1-201ENST00000415277 523 ntBASIC19.24■□□□□ 0.67
PRAMEF11O60813 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.24■□□□□ 0.67
PRAMEF11O60813 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.24■□□□□ 0.67
PRAMEF11O60813 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.24■□□□□ 0.67
PRAMEF11O60813 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.24■□□□□ 0.67
PRAMEF11O60813 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.24■□□□□ 0.67
PRAMEF11O60813 AC128688.1-201ENST00000487626 519 ntBASIC19.24■□□□□ 0.67
PRAMEF11O60813 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
PRAMEF11O60813 AP003041.3-201ENST00000527151 707 ntBASIC19.24■□□□□ 0.67
PRAMEF11O60813 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.24■□□□□ 0.67
PRAMEF11O60813 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.24■□□□□ 0.67
PRAMEF11O60813 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.24■□□□□ 0.67
PRAMEF11O60813 AC010653.2-201ENST00000623505 997 ntBASIC19.24■□□□□ 0.67
PRAMEF11O60813 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF11O60813 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF11O60813 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.24■□□□□ 0.67
PRAMEF11O60813 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
PRAMEF11O60813 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.24■□□□□ 0.67
PRAMEF11O60813 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PRAMEF11O60813 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PRAMEF11O60813 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PRAMEF11O60813 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF11O60813 KRT8P32-201ENST00000512863 1461 ntBASIC19.23■□□□□ 0.67
PRAMEF11O60813 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF11O60813 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF11O60813 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF11O60813 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.23■□□□□ 0.67
PRAMEF11O60813 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF11O60813 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.23■□□□□ 0.67
PRAMEF11O60813 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF11O60813 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.23■□□□□ 0.67
PRAMEF11O60813 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.23■□□□□ 0.67
PRAMEF11O60813 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF11O60813 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF11O60813 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.23■□□□□ 0.67
PRAMEF11O60813 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PRAMEF11O60813 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF11O60813 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF11O60813 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF11O60813 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PRAMEF11O60813 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF11O60813 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF11O60813 KRT18P22-201ENST00000402024 1347 ntBASIC19.23■□□□□ 0.67
PRAMEF11O60813 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.23■□□□□ 0.67
PRAMEF11O60813 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEF11O60813 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.23■□□□□ 0.67
PRAMEF11O60813 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF11O60813 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF11O60813 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.22■□□□□ 0.67
PRAMEF11O60813 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF11O60813 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.22■□□□□ 0.67
PRAMEF11O60813 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF11O60813 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF11O60813 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.22■□□□□ 0.67
PRAMEF11O60813 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF11O60813 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF11O60813 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.22■□□□□ 0.67
PRAMEF11O60813 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.22■□□□□ 0.67
PRAMEF11O60813 ECEL1P2-202ENST00000465689 757 ntBASIC19.22■□□□□ 0.67
PRAMEF11O60813 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.22■□□□□ 0.67
PRAMEF11O60813 MIR4674-201ENST00000582457 87 ntBASIC19.22■□□□□ 0.67
PRAMEF11O60813 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF11O60813 FAM87A-204ENST00000613235 858 ntBASIC19.22■□□□□ 0.67
PRAMEF11O60813 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF11O60813 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF11O60813 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
PRAMEF11O60813 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF11O60813 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEF11O60813 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms