Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 AC104819.1-201ENST00000504587 486 ntBASIC17.81■□□□□ 0.44
RRP8O43159 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.81■□□□□ 0.44
RRP8O43159 MIR4674-201ENST00000582457 87 ntBASIC17.81■□□□□ 0.44
RRP8O43159 AC064862.7-201ENST00000604520 867 ntBASIC17.81■□□□□ 0.44
RRP8O43159 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RRP8O43159 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RRP8O43159 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.81■□□□□ 0.44
RRP8O43159 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RRP8O43159 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RRP8O43159 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RRP8O43159 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RRP8O43159 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RRP8O43159 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RRP8O43159 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RRP8O43159 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.81■□□□□ 0.44
RRP8O43159 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RRP8O43159 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RRP8O43159 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RRP8O43159 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.8■□□□□ 0.44
RRP8O43159 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RRP8O43159 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RRP8O43159 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RRP8O43159 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RRP8O43159 TOB2P1-201ENST00000469761 992 ntBASIC17.8■□□□□ 0.44
RRP8O43159 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.8■□□□□ 0.44
RRP8O43159 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.8■□□□□ 0.44
RRP8O43159 TPSP2-201ENST00000561760 610 ntBASIC17.8■□□□□ 0.44
RRP8O43159 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RRP8O43159 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RRP8O43159 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RRP8O43159 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.8■□□□□ 0.44
RRP8O43159 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.8■□□□□ 0.44
RRP8O43159 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RRP8O43159 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.79■□□□□ 0.44
RRP8O43159 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RRP8O43159 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RRP8O43159 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.79■□□□□ 0.44
RRP8O43159 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.79■□□□□ 0.44
RRP8O43159 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RRP8O43159 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RRP8O43159 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RRP8O43159 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RRP8O43159 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
RRP8O43159 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RRP8O43159 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RRP8O43159 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
RRP8O43159 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RRP8O43159 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.79■□□□□ 0.44
RRP8O43159 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.79■□□□□ 0.44
RRP8O43159 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.79■□□□□ 0.44
RRP8O43159 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RRP8O43159 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.79■□□□□ 0.44
RRP8O43159 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RRP8O43159 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.79■□□□□ 0.44
RRP8O43159 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
RRP8O43159 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RRP8O43159 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
RRP8O43159 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RRP8O43159 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RRP8O43159 FEM1AP1-201ENST00000431297 1995 ntBASIC17.79■□□□□ 0.44
RRP8O43159 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RRP8O43159 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RRP8O43159 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.79■□□□□ 0.44
RRP8O43159 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
RRP8O43159 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RRP8O43159 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RRP8O43159 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RRP8O43159 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RRP8O43159 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RRP8O43159 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RRP8O43159 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RRP8O43159 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RRP8O43159 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.78■□□□□ 0.44
RRP8O43159 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.78■□□□□ 0.44
RRP8O43159 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RRP8O43159 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RRP8O43159 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
RRP8O43159 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RRP8O43159 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RRP8O43159 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.78■□□□□ 0.44
RRP8O43159 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RRP8O43159 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RRP8O43159 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.78■□□□□ 0.44
RRP8O43159 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.78■□□□□ 0.44
RRP8O43159 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.78■□□□□ 0.44
RRP8O43159 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RRP8O43159 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
RRP8O43159 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RRP8O43159 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RRP8O43159 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RRP8O43159 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RRP8O43159 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.77■□□□□ 0.44
RRP8O43159 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RRP8O43159 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RRP8O43159 LINC01006-201ENST00000333319 2292 ntBASIC17.77■□□□□ 0.44
RRP8O43159 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RRP8O43159 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RRP8O43159 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RRP8O43159 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.77■□□□□ 0.44
RRP8O43159 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms