Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TO15178 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.47■□□□□ 0.39
TO15178 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TO15178 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TO15178 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TO15178 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TO15178 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.47■□□□□ 0.39
TO15178 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TO15178 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TO15178 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.47■□□□□ 0.39
TO15178 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TO15178 EGLN1P1-201ENST00000531623 762 ntBASIC17.47■□□□□ 0.39
TO15178 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TO15178 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.47■□□□□ 0.39
TO15178 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TO15178 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TO15178 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.47■□□□□ 0.39
TO15178 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TO15178 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.47■□□□□ 0.39
TO15178 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TO15178 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TO15178 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TO15178 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TO15178 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TO15178 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TO15178 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TO15178 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
TO15178 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.47■□□□□ 0.39
TO15178 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
TO15178 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TO15178 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
TO15178 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TO15178 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TO15178 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TO15178 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TO15178 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.46■□□□□ 0.39
TO15178 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TO15178 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TO15178 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TO15178 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.46■□□□□ 0.39
TO15178 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TO15178 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TO15178 NAPSB-206ENST00000562112 1266 ntBASIC17.46■□□□□ 0.39
TO15178 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TO15178 AC010947.1-201ENST00000623454 693 ntBASIC17.46■□□□□ 0.39
TO15178 AC073912.3-201ENST00000624414 853 ntBASIC17.46■□□□□ 0.39
TO15178 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TO15178 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TO15178 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TO15178 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
TO15178 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TO15178 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.46■□□□□ 0.39
TO15178 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TO15178 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.38
TO15178 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TO15178 BX323043.1-201ENST00000641006 1765 ntBASIC17.45■□□□□ 0.38
TO15178 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TO15178 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TO15178 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TO15178 CYP2D8P-201ENST00000433633 1490 ntBASIC17.45■□□□□ 0.38
TO15178 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.45■□□□□ 0.38
TO15178 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
TO15178 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TO15178 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TO15178 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
TO15178 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TO15178 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TO15178 AC087499.1-201ENST00000418141 1075 ntBASIC17.45■□□□□ 0.38
TO15178 CCR12P-201ENST00000446203 998 ntBASIC17.45■□□□□ 0.38
TO15178 TSPY17P-201ENST00000450329 467 ntBASIC17.45■□□□□ 0.38
TO15178 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TO15178 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.45■□□□□ 0.38
TO15178 AL353719.1-201ENST00000566847 864 ntBASIC17.45■□□□□ 0.38
TO15178 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TO15178 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TO15178 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TO15178 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TO15178 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TO15178 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
TO15178 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TO15178 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.45■□□□□ 0.38
TO15178 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.44■□□□□ 0.38
TO15178 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TO15178 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TO15178 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TO15178 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TO15178 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TO15178 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TO15178 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TO15178 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TO15178 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TO15178 AL049812.1-201ENST00000432563 2267 ntBASIC17.44■□□□□ 0.38
TO15178 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TO15178 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
TO15178 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.44■□□□□ 0.38
TO15178 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
TO15178 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
TO15178 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.44■□□□□ 0.38
TO15178 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TO15178 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms