Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH17O14917 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH17O14917 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDH17O14917 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
PCDH17O14917 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDH17O14917 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDH17O14917 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDH17O14917 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.11■□□□□ 0.49
PCDH17O14917 AC011298.2-201ENST00000617989 482 ntBASIC18.11■□□□□ 0.49
PCDH17O14917 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDH17O14917 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDH17O14917 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDH17O14917 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH17O14917 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH17O14917 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH17O14917 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH17O14917 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDH17O14917 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH17O14917 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH17O14917 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH17O14917 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
PCDH17O14917 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH17O14917 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH17O14917 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCDH17O14917 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH17O14917 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH17O14917 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH17O14917 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PCDH17O14917 LINC01465-201ENST00000408887 1940 ntBASIC18.1■□□□□ 0.49
PCDH17O14917 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
PCDH17O14917 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH17O14917 AC096733.2-201ENST00000609937 1394 ntBASIC18.1■□□□□ 0.49
PCDH17O14917 KRT18P22-201ENST00000402024 1347 ntBASIC18.1■□□□□ 0.49
PCDH17O14917 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH17O14917 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH17O14917 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH17O14917 AC011506.1-201ENST00000474329 610 ntBASIC18.1■□□□□ 0.49
PCDH17O14917 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDH17O14917 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.1■□□□□ 0.49
PCDH17O14917 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH17O14917 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH17O14917 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH17O14917 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH17O14917 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDH17O14917 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PCDH17O14917 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH17O14917 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH17O14917 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH17O14917 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDH17O14917 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH17O14917 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH17O14917 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH17O14917 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
PCDH17O14917 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH17O14917 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH17O14917 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH17O14917 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH17O14917 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH17O14917 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH17O14917 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH17O14917 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDH17O14917 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PCDH17O14917 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
PCDH17O14917 FAM207BP-201ENST00000447172 505 ntBASIC18.09■□□□□ 0.49
PCDH17O14917 AC097488.1-201ENST00000507834 756 ntBASIC18.09■□□□□ 0.49
PCDH17O14917 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDH17O14917 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDH17O14917 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH17O14917 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH17O14917 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH17O14917 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
PCDH17O14917 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PCDH17O14917 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH17O14917 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH17O14917 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
PCDH17O14917 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDH17O14917 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH17O14917 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
PCDH17O14917 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH17O14917 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH17O14917 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH17O14917 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
PCDH17O14917 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDH17O14917 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH17O14917 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH17O14917 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
PCDH17O14917 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH17O14917 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH17O14917 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.08■□□□□ 0.49
PCDH17O14917 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
PCDH17O14917 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDH17O14917 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH17O14917 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH17O14917 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDH17O14917 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.08■□□□□ 0.48
PCDH17O14917 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH17O14917 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.08■□□□□ 0.48
PCDH17O14917 AC128688.1-201ENST00000487626 519 ntBASIC18.08■□□□□ 0.48
PCDH17O14917 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH17O14917 Z85996.1-201ENST00000494644 937 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms