Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHD2O14647 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC26.41■■□□□ 1.82
CHD2O14647 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC26.41■■□□□ 1.82
CHD2O14647 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC26.41■■□□□ 1.82
CHD2O14647 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC26.41■■□□□ 1.82
CHD2O14647 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHD2O14647 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHD2O14647 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CHD2O14647 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHD2O14647 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHD2O14647 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC26.4■■□□□ 1.82
CHD2O14647 MIR1233-2-201ENST00000408138 82 ntBASIC26.4■■□□□ 1.82
CHD2O14647 MIR1233-1-201ENST00000408722 82 ntBASIC26.4■■□□□ 1.82
CHD2O14647 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC26.4■■□□□ 1.82
CHD2O14647 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC26.4■■□□□ 1.82
CHD2O14647 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC26.4■■□□□ 1.82
CHD2O14647 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC26.4■■□□□ 1.82
CHD2O14647 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CHD2O14647 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHD2O14647 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CHD2O14647 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHD2O14647 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CHD2O14647 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CHD2O14647 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC26.4■■□□□ 1.82
CHD2O14647 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CHD2O14647 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC26.39■■□□□ 1.82
CHD2O14647 IGHGP-201ENST00000390555 1178 ntBASIC26.39■■□□□ 1.82
CHD2O14647 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CHD2O14647 HMGN1P19-201ENST00000436976 333 ntBASIC26.39■■□□□ 1.82
CHD2O14647 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC26.39■■□□□ 1.82
CHD2O14647 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC26.39■■□□□ 1.82
CHD2O14647 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC26.39■■□□□ 1.82
CHD2O14647 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.82
CHD2O14647 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CHD2O14647 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC26.39■■□□□ 1.82
CHD2O14647 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CHD2O14647 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC26.39■■□□□ 1.82
CHD2O14647 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CHD2O14647 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CHD2O14647 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC26.39■■□□□ 1.81
CHD2O14647 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CHD2O14647 AL031284.1-201ENST00000419297 478 ntBASIC26.39■■□□□ 1.81
CHD2O14647 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC26.39■■□□□ 1.81
CHD2O14647 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC26.39■■□□□ 1.81
CHD2O14647 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CHD2O14647 RPL18-209ENST00000550645 463 ntTSL 5 BASIC26.39■■□□□ 1.81
CHD2O14647 RPL18-214ENST00000552588 559 ntTSL 3 BASIC26.39■■□□□ 1.81
CHD2O14647 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC26.39■■□□□ 1.81
CHD2O14647 BNIP3P18-201ENST00000593976 575 ntBASIC26.39■■□□□ 1.81
CHD2O14647 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CHD2O14647 CCNC-219ENST00000627680 896 ntTSL 5 BASIC26.39■■□□□ 1.81
CHD2O14647 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CHD2O14647 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CHD2O14647 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CHD2O14647 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC26.39■■□□□ 1.81
CHD2O14647 KRT8P7-201ENST00000533003 1432 ntBASIC26.39■■□□□ 1.81
CHD2O14647 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD2O14647 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
CHD2O14647 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD2O14647 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD2O14647 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD2O14647 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD2O14647 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD2O14647 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD2O14647 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD2O14647 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD2O14647 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
CHD2O14647 COX10-202ENST00000429152 875 ntTSL 2 BASIC26.38■■□□□ 1.81
CHD2O14647 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD2O14647 AC092183.1-201ENST00000469884 875 ntBASIC26.38■■□□□ 1.81
CHD2O14647 POLD2P1-201ENST00000511220 997 ntBASIC26.38■■□□□ 1.81
CHD2O14647 AC106730.1-201ENST00000566722 1090 ntBASIC26.38■■□□□ 1.81
CHD2O14647 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD2O14647 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD2O14647 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC26.38■■□□□ 1.81
CHD2O14647 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD2O14647 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC26.38■■□□□ 1.81
CHD2O14647 AL512408.1-201ENST00000569378 2000 ntBASIC26.38■■□□□ 1.81
CHD2O14647 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC26.37■■□□□ 1.81
CHD2O14647 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CHD2O14647 ELP6-205ENST00000439305 880 ntTSL 2 BASIC26.37■■□□□ 1.81
CHD2O14647 AC005332.3-201ENST00000589904 676 ntBASIC26.37■■□□□ 1.81
CHD2O14647 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC26.37■■□□□ 1.81
CHD2O14647 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHD2O14647 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC26.37■■□□□ 1.81
CHD2O14647 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC26.37■■□□□ 1.81
CHD2O14647 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC26.37■■□□□ 1.81
CHD2O14647 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHD2O14647 MED22-202ENST00000371999 987 ntTSL 3 BASIC26.37■■□□□ 1.81
CHD2O14647 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHD2O14647 FAM197Y8-203ENST00000450145 560 ntBASIC26.37■■□□□ 1.81
CHD2O14647 VENTXP7-201ENST00000475503 772 ntBASIC26.37■■□□□ 1.81
CHD2O14647 AC073314.1-201ENST00000568729 2216 ntBASIC26.37■■□□□ 1.81
CHD2O14647 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHD2O14647 AC124864.1-201ENST00000623408 392 ntBASIC26.37■■□□□ 1.81
CHD2O14647 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC26.36■■□□□ 1.81
CHD2O14647 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
CHD2O14647 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC26.36■■□□□ 1.81
CHD2O14647 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHD2O14647 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms