Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL21O00585 HLA-F-220ENST00000434407 884 ntBASIC16.7■□□□□ 0.26
CCL21O00585 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.7■□□□□ 0.26
CCL21O00585 LINC00265-3P-201ENST00000447588 903 ntBASIC16.7■□□□□ 0.26
CCL21O00585 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCL21O00585 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCL21O00585 AC091304.2-201ENST00000564639 760 ntBASIC16.7■□□□□ 0.26
CCL21O00585 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.7■□□□□ 0.26
CCL21O00585 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.7■□□□□ 0.26
CCL21O00585 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.7■□□□□ 0.26
CCL21O00585 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.7■□□□□ 0.26
CCL21O00585 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.7■□□□□ 0.26
CCL21O00585 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL21O00585 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL21O00585 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL21O00585 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.7■□□□□ 0.26
CCL21O00585 AL391807.1-203ENST00000604392 2365 ntBASIC16.7■□□□□ 0.26
CCL21O00585 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL21O00585 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCL21O00585 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
CCL21O00585 AL162377.1-201ENST00000618844 1793 ntBASIC16.69■□□□□ 0.26
CCL21O00585 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL21O00585 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.69■□□□□ 0.26
CCL21O00585 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL21O00585 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL21O00585 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL21O00585 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CCL21O00585 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL21O00585 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.69■□□□□ 0.26
CCL21O00585 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL21O00585 PVRIG2P-201ENST00000435460 978 ntBASIC16.69■□□□□ 0.26
CCL21O00585 AP000347.1-202ENST00000435868 847 ntBASIC16.69■□□□□ 0.26
CCL21O00585 EMBP1-201ENST00000458200 901 ntBASIC16.69■□□□□ 0.26
CCL21O00585 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCL21O00585 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCL21O00585 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.69■□□□□ 0.26
CCL21O00585 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.69■□□□□ 0.26
CCL21O00585 MIR3917-201ENST00000580971 93 ntBASIC16.69■□□□□ 0.26
CCL21O00585 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL21O00585 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL21O00585 AL732292.2-201ENST00000609649 430 ntBASIC16.69■□□□□ 0.26
CCL21O00585 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.69■□□□□ 0.26
CCL21O00585 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CCL21O00585 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.69■□□□□ 0.26
CCL21O00585 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL21O00585 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL21O00585 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCL21O00585 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL21O00585 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCL21O00585 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.69■□□□□ 0.26
CCL21O00585 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL21O00585 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL21O00585 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.68■□□□□ 0.26
CCL21O00585 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL21O00585 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL21O00585 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CCL21O00585 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL21O00585 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL21O00585 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CCL21O00585 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL21O00585 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL21O00585 MIR662-201ENST00000384847 95 ntBASIC16.68■□□□□ 0.26
CCL21O00585 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL21O00585 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL21O00585 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL21O00585 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCL21O00585 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CCL21O00585 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCL21O00585 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.68■□□□□ 0.26
CCL21O00585 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.68■□□□□ 0.26
CCL21O00585 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.68■□□□□ 0.26
CCL21O00585 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCL21O00585 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCL21O00585 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL21O00585 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL21O00585 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.67■□□□□ 0.26
CCL21O00585 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CCL21O00585 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL21O00585 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL21O00585 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL21O00585 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.67■□□□□ 0.26
CCL21O00585 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
CCL21O00585 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCL21O00585 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL21O00585 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.67■□□□□ 0.26
CCL21O00585 TSPY19P-201ENST00000418461 509 ntBASIC16.67■□□□□ 0.26
CCL21O00585 TSPY18P-201ENST00000441642 509 ntBASIC16.67■□□□□ 0.26
CCL21O00585 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.67■□□□□ 0.26
CCL21O00585 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.67■□□□□ 0.26
CCL21O00585 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCL21O00585 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCL21O00585 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.67■□□□□ 0.26
CCL21O00585 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL21O00585 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL21O00585 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.67■□□□□ 0.26
CCL21O00585 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL21O00585 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.67■□□□□ 0.26
CCL21O00585 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CCL21O00585 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CCL21O00585 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms