Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA4O00483 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA4O00483 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA4O00483 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC14.57□□□□□ -0.08
NDUFA4O00483 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA4O00483 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
NDUFA4O00483 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA4O00483 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA4O00483 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NDUFA4O00483 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA4O00483 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA4O00483 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA4O00483 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA4O00483 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA4O00483 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA4O00483 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.57□□□□□ -0.08
NDUFA4O00483 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.57□□□□□ -0.08
NDUFA4O00483 AC008550.1-201ENST00000511500 884 ntBASIC14.57□□□□□ -0.08
NDUFA4O00483 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.57□□□□□ -0.08
NDUFA4O00483 CKBP1-201ENST00000565489 1086 ntBASIC14.57□□□□□ -0.08
NDUFA4O00483 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.57□□□□□ -0.08
NDUFA4O00483 AP000692.2-201ENST00000608391 879 ntBASIC14.57□□□□□ -0.08
NDUFA4O00483 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA4O00483 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.57□□□□□ -0.08
NDUFA4O00483 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC14.57□□□□□ -0.08
NDUFA4O00483 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NDUFA4O00483 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC14.57□□□□□ -0.08
NDUFA4O00483 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.57□□□□□ -0.08
NDUFA4O00483 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
NDUFA4O00483 KATNBL1P6-202ENST00000562413 1466 ntBASIC14.57□□□□□ -0.08
NDUFA4O00483 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA4O00483 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA4O00483 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA4O00483 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.56□□□□□ -0.08
NDUFA4O00483 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA4O00483 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA4O00483 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA4O00483 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA4O00483 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
NDUFA4O00483 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NDUFA4O00483 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA4O00483 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC14.56□□□□□ -0.08
NDUFA4O00483 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA4O00483 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA4O00483 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.56□□□□□ -0.08
NDUFA4O00483 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.56□□□□□ -0.08
NDUFA4O00483 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC14.56□□□□□ -0.08
NDUFA4O00483 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA4O00483 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA4O00483 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA4O00483 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA4O00483 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA4O00483 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA4O00483 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA4O00483 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.56□□□□□ -0.08
NDUFA4O00483 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA4O00483 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.56□□□□□ -0.08
NDUFA4O00483 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC14.56□□□□□ -0.08
NDUFA4O00483 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA4O00483 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NDUFA4O00483 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NDUFA4O00483 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.55□□□□□ -0.08
NDUFA4O00483 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFA4O00483 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFA4O00483 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFA4O00483 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFA4O00483 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFA4O00483 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFA4O00483 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.55□□□□□ -0.08
NDUFA4O00483 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFA4O00483 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFA4O00483 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NDUFA4O00483 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NDUFA4O00483 MESTP1-201ENST00000404287 994 ntBASIC14.55□□□□□ -0.08
NDUFA4O00483 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.55□□□□□ -0.08
NDUFA4O00483 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
NDUFA4O00483 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.55□□□□□ -0.08
NDUFA4O00483 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.55□□□□□ -0.08
NDUFA4O00483 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.55□□□□□ -0.08
NDUFA4O00483 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.55□□□□□ -0.08
NDUFA4O00483 Z99916.2-201ENST00000604037 246 ntBASIC14.55□□□□□ -0.08
NDUFA4O00483 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFA4O00483 AC083906.6-201ENST00000641366 219 ntBASIC14.55□□□□□ -0.08
NDUFA4O00483 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFA4O00483 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFA4O00483 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC14.55□□□□□ -0.08
NDUFA4O00483 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC14.55□□□□□ -0.08
NDUFA4O00483 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
NDUFA4O00483 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFA4O00483 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFA4O00483 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFA4O00483 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFA4O00483 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.55□□□□□ -0.08
NDUFA4O00483 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFA4O00483 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFA4O00483 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NDUFA4O00483 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFA4O00483 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NDUFA4O00483 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC14.55□□□□□ -0.08
NDUFA4O00483 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms