Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC13.88□□□□□ -0.19
SMKR1H3BMG3 TERF1P5-201ENST00000477545 1207 ntBASIC13.88□□□□□ -0.19
SMKR1H3BMG3 PBX1-209ENST00000485769 834 ntTSL 2 BASIC13.88□□□□□ -0.19
SMKR1H3BMG3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMKR1H3BMG3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC13.88□□□□□ -0.19
SMKR1H3BMG3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMKR1H3BMG3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMKR1H3BMG3 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SMKR1H3BMG3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMKR1H3BMG3 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMKR1H3BMG3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.88□□□□□ -0.19
SMKR1H3BMG3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC13.88□□□□□ -0.19
SMKR1H3BMG3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SMKR1H3BMG3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SMKR1H3BMG3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
SMKR1H3BMG3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 UQCRFS1P1-201ENST00000435169 820 ntBASIC13.87□□□□□ -0.19
SMKR1H3BMG3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 SUDS3P1-201ENST00000505831 966 ntBASIC13.87□□□□□ -0.19
SMKR1H3BMG3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SMKR1H3BMG3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 AC126763.1-201ENST00000552015 2118 ntBASIC13.86□□□□□ -0.19
SMKR1H3BMG3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 AC116351.2-201ENST00000606540 1585 ntBASIC13.86□□□□□ -0.19
SMKR1H3BMG3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 AC008764.6-201ENST00000595909 2069 ntBASIC13.86□□□□□ -0.19
SMKR1H3BMG3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SMKR1H3BMG3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.85□□□□□ -0.19
SMKR1H3BMG3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMKR1H3BMG3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMKR1H3BMG3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
SMKR1H3BMG3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMKR1H3BMG3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SMKR1H3BMG3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms