Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
HFM1A2PYH4 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC28.07■■■□□ 2.08
HFM1A2PYH4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
HFM1A2PYH4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
HFM1A2PYH4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC28.07■■■□□ 2.08
HFM1A2PYH4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
HFM1A2PYH4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
HFM1A2PYH4 SAPCD2P2-201ENST00000431719 1174 ntBASIC28.07■■■□□ 2.08
HFM1A2PYH4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC28.07■■■□□ 2.08
HFM1A2PYH4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC28.07■■■□□ 2.08
HFM1A2PYH4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC28.07■■■□□ 2.08
HFM1A2PYH4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
HFM1A2PYH4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC28.07■■■□□ 2.08
HFM1A2PYH4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
HFM1A2PYH4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
HFM1A2PYH4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
HFM1A2PYH4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC28.07■■■□□ 2.08
HFM1A2PYH4 HEIH-201ENST00000623091 1652 ntBASIC28.07■■■□□ 2.08
HFM1A2PYH4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC28.07■■■□□ 2.08
HFM1A2PYH4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC28.07■■■□□ 2.08
HFM1A2PYH4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
HFM1A2PYH4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
HFM1A2PYH4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HFM1A2PYH4 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HFM1A2PYH4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC28.06■■■□□ 2.08
HFM1A2PYH4 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC28.06■■■□□ 2.08
HFM1A2PYH4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HFM1A2PYH4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
HFM1A2PYH4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HFM1A2PYH4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC28.06■■■□□ 2.08
HFM1A2PYH4 SEC1P-202ENST00000473944 940 ntBASIC28.06■■■□□ 2.08
HFM1A2PYH4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
HFM1A2PYH4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC28.06■■■□□ 2.08
HFM1A2PYH4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC28.06■■■□□ 2.08
HFM1A2PYH4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
HFM1A2PYH4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
HFM1A2PYH4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC28.06■■■□□ 2.08
HFM1A2PYH4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
HFM1A2PYH4 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC28.06■■■□□ 2.08
HFM1A2PYH4 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC28.06■■■□□ 2.08
HFM1A2PYH4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC28.05■■■□□ 2.08
HFM1A2PYH4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
HFM1A2PYH4 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC28.05■■■□□ 2.08
HFM1A2PYH4 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC28.05■■■□□ 2.08
HFM1A2PYH4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
HFM1A2PYH4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
HFM1A2PYH4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC28.05■■■□□ 2.08
HFM1A2PYH4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC28.05■■■□□ 2.08
HFM1A2PYH4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC28.05■■■□□ 2.08
HFM1A2PYH4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
HFM1A2PYH4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
HFM1A2PYH4 AL031432.5-201ENST00000641059 760 ntBASIC28.05■■■□□ 2.08
HFM1A2PYH4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
HFM1A2PYH4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC28.05■■■□□ 2.08
HFM1A2PYH4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
HFM1A2PYH4 HOXB1-202ENST00000577092 1414 ntBASIC28.04■■■□□ 2.08
HFM1A2PYH4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC28.04■■■□□ 2.08
HFM1A2PYH4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
HFM1A2PYH4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
HFM1A2PYH4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
HFM1A2PYH4 HOMER2P1-201ENST00000455653 964 ntBASIC28.04■■■□□ 2.08
HFM1A2PYH4 AL359075.1-203ENST00000462729 1002 ntBASIC28.04■■■□□ 2.08
HFM1A2PYH4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC28.04■■■□□ 2.08
HFM1A2PYH4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC28.04■■■□□ 2.08
HFM1A2PYH4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC28.04■■■□□ 2.08
HFM1A2PYH4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC28.04■■■□□ 2.08
HFM1A2PYH4 AC083849.1-201ENST00000615227 514 ntBASIC28.04■■■□□ 2.08
HFM1A2PYH4 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC28.04■■■□□ 2.08
HFM1A2PYH4 AC083906.6-201ENST00000641366 219 ntBASIC28.04■■■□□ 2.08
HFM1A2PYH4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
HFM1A2PYH4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
HFM1A2PYH4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
HFM1A2PYH4 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
HFM1A2PYH4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
HFM1A2PYH4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
HFM1A2PYH4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
HFM1A2PYH4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
HFM1A2PYH4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC28.03■■■□□ 2.08
HFM1A2PYH4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC28.03■■■□□ 2.08
HFM1A2PYH4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
HFM1A2PYH4 STARP1-201ENST00000397973 869 ntBASIC28.03■■■□□ 2.08
HFM1A2PYH4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC28.03■■■□□ 2.08
HFM1A2PYH4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
HFM1A2PYH4 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
HFM1A2PYH4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
HFM1A2PYH4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
HFM1A2PYH4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC28.03■■■□□ 2.08
HFM1A2PYH4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
HFM1A2PYH4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
HFM1A2PYH4 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
HFM1A2PYH4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
HFM1A2PYH4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
HFM1A2PYH4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
HFM1A2PYH4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
HFM1A2PYH4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC28.02■■■□□ 2.08
HFM1A2PYH4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
HFM1A2PYH4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
HFM1A2PYH4 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC28.02■■■□□ 2.08
HFM1A2PYH4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
HFM1A2PYH4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms