Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 GXYLT1P2-201ENST00000433312 1230 ntBASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 RPS2P52-201ENST00000469610 820 ntBASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 KRT18P16-201ENST00000510337 1294 ntBASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRBV27A0A0K0K1C4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 AC067852.2-201ENST00000590513 2313 ntBASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 AC133552.2-202ENST00000575694 574 ntBASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 AC008764.6-201ENST00000595909 2069 ntBASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 AC124283.5-201ENST00000624661 1809 ntBASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRBV27A0A0K0K1C4 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 GUK1-205ENST00000366722 850 ntTSL 3 BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms