Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 MARS-234ENST00000630571 216 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 MARS-235ENST00000630803 183 ntTSL 3 BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.75□□□□□ -0.05
TRAV5A0A0B4J249 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 YBX1P10-201ENST00000444752 975 ntBASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.74□□□□□ -0.05
TRAV5A0A0B4J249 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 AF201337.1-201ENST00000520239 748 ntBASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV5A0A0B4J249 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms