Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 SEC1P-202ENST00000473944 940 ntBASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 MIR3180-1-201ENST00000580374 94 ntBASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 MIR3180-3-201ENST00000584616 94 ntBASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 GABARAPL3-202ENST00000624044 1851 ntBASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 AL157384.1-201ENST00000445995 2473 ntBASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC187A0A096LP49 AL391422.3-201ENST00000603791 2761 ntBASIC17.96■□□□□ 0.46
CCDC187A0A096LP49 AL162741.1-201ENST00000565563 1558 ntBASIC17.96■□□□□ 0.46
CCDC187A0A096LP49 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 AC246785.2-201ENST00000432512 513 ntBASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 AP002383.4-201ENST00000442518 975 ntBASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 FAAHP1-202ENST00000446499 1238 ntBASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 AC112497.1-201ENST00000624824 639 ntBASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC187A0A096LP49 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 CHCHD2P8-201ENST00000429873 447 ntBASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 AP002414.4-201ENST00000589764 1148 ntBASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 SDHAP1-207ENST00000440850 2000 ntBASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC187A0A096LP49 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
CCDC187A0A096LP49 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms