Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC13.74□□□□□ -0.21
TRAV26-1A0A087WT03 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TRAV26-1A0A087WT03 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV26-1A0A087WT03 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.74□□□□□ -0.21
TRAV26-1A0A087WT03 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV26-1A0A087WT03 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV26-1A0A087WT03 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
TRAV26-1A0A087WT03 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV26-1A0A087WT03 PCDHB18P-201ENST00000524813 2368 ntBASIC13.74□□□□□ -0.21
TRAV26-1A0A087WT03 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
TRAV26-1A0A087WT03 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV26-1A0A087WT03 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
TRAV26-1A0A087WT03 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV26-1A0A087WT03 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV26-1A0A087WT03 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV26-1A0A087WT03 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV26-1A0A087WT03 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV26-1A0A087WT03 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
TRAV26-1A0A087WT03 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
TRAV26-1A0A087WT03 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
TRAV26-1A0A087WT03 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
TRAV26-1A0A087WT03 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC13.72□□□□□ -0.21
TRAV26-1A0A087WT03 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms