Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 Y_RNA.633-201ENST00000459107 95 ntBASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 snoU13.28-201ENST00000459235 104 ntBASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 RN7SL705P-201ENST00000481678 294 ntBASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 RN7SL591P-201ENST00000496150 292 ntBASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 RNA5SP112-201ENST00000515937 99 ntBASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 RNU6-518P-201ENST00000516056 96 ntBASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 RN7SKP238-201ENST00000516483 249 ntBASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 MIR548AG2-201ENST00000581228 64 ntBASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 SNORD96A-201ENST00000606577 79 ntBASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 SNORA74.4-201ENST00000607595 199 ntBASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 AC010297.1-201ENST00000623948 149 ntBASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 AC000095.2-202ENST00000637415 154 ntBASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 5S_rRNA.28-201ENST00000638107 119 ntBASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 WDR44-201ENST00000254029 4111 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP4-11Q9BYQ6 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 AC020658.2-201ENST00000559030 4020 ntBASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 PHLPP2-206ENST00000568954 8317 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 PKHD1-201ENST00000340994 11589 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 AC062016.1-201ENST00000355719 319 ntBASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 MIR9-1-201ENST00000385198 89 ntBASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 RNU6-1055P-201ENST00000391085 107 ntBASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 AC245884.2-201ENST00000426257 404 ntBASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 RN7SL797P-201ENST00000486314 297 ntBASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 RNA5SP418-201ENST00000515951 117 ntBASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 RNA5SP438-201ENST00000516561 112 ntBASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 RPL10P18-201ENST00000519384 309 ntBASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 MIR4437-201ENST00000581331 60 ntBASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 AC245014.3-201ENST00000618589 347 ntBASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 AC034229.5-201ENST00000624258 185 ntBASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 GCNT1-202ENST00000442371 5972 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 TRIM66-202ENST00000402157 10086 ntAPPRIS P5 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 LRRC37A9P-201ENST00000603850 5376 ntBASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 ZNF45-206ENST00000615985 2912 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP4-11Q9BYQ6 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms