Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 Y_RNA.352-201ENST00000365439 102 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 MIR649-201ENST00000384843 97 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 MIR513A1-201ENST00000385138 129 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 RNU5E-9P-201ENST00000411164 104 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 AL513043.1-201ENST00000439124 535 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 CLIC4P1-201ENST00000453177 535 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 AC234775.1-201ENST00000454247 670 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 AC087879.1-201ENST00000474343 374 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 RNU6-277P-201ENST00000516272 106 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 RNA5SP461-201ENST00000516451 104 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 MRPS36P4-201ENST00000534436 298 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 AC007229.1-201ENST00000590455 412 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 OR10AB1P-201ENST00000609613 938 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 AC103710.2-201ENST00000609912 942 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 AC069503.3-201ENST00000618674 145 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 PRICKLE2-201ENST00000295902 7918 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 AC007685.1-201ENST00000329806 452 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 SNORD116-24-201ENST00000384549 92 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 RNU6-1067P-201ENST00000384752 107 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 MT-TW-201ENST00000387382 68 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.602-201ENST00000410535 92 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 NDUFS5P4-201ENST00000412983 318 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 AL589765.3-201ENST00000446084 462 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 Z99127.3-201ENST00000448158 395 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 RPL39P25-201ENST00000449384 154 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 HMGN2P23-201ENST00000456759 269 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 RNU6-861P-201ENST00000516745 106 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 RNU6-419P-201ENST00000517030 63 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 RNU6-1261P-201ENST00000517194 104 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 AC136777.2-201ENST00000522979 358 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 MIR1244-1-201ENST00000612829 85 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 U4.6-201ENST00000621618 127 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 MIR1244-3-201ENST00000635744 85 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 U6.100-201ENST00000636230 99 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 MIR1244-2-201ENST00000636449 85 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 MIR1244-4-202ENST00000636813 85 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 MIR548AH-201ENST00000637109 76 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 RNU6-924P-201ENST00000362926 108 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.646-201ENST00000410980 101 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 RPL39P40-201ENST00000445481 146 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 ATP5J2P3-201ENST00000451550 258 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.649-201ENST00000459077 103 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 AC021205.1-201ENST00000468797 348 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 AP005597.4-201ENST00000526762 229 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 AL590240.4-201ENST00000616908 390 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.818-201ENST00000618813 71 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 AL121890.5-201ENST00000620848 304 ntBASIC1.15□□□□□ -2.23
HMCN1Q96RW7 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
HMCN1Q96RW7 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC1.14□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.1-201ENST00000352915 104 ntBASIC1.14□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.259-201ENST00000364619 101 ntBASIC1.14□□□□□ -2.23
HMCN1Q96RW7 Y_RNA.383-201ENST00000383855 97 ntBASIC1.14□□□□□ -2.23
HMCN1Q96RW7 AL590004.2-201ENST00000404787 371 ntBASIC1.14□□□□□ -2.23
HMCN1Q96RW7 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.14□□□□□ -2.23
HMCN1Q96RW7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC1.14□□□□□ -2.23
HMCN1Q96RW7 AL135938.1-201ENST00000443141 297 ntBASIC1.14□□□□□ -2.23
HMCN1Q96RW7 AC006511.1-201ENST00000470614 315 ntBASIC1.14□□□□□ -2.23
HMCN1Q96RW7 AC084198.1-201ENST00000477747 402 ntBASIC1.14□□□□□ -2.23
HMCN1Q96RW7 SCARNA17.1-201ENST00000516211 143 ntBASIC1.14□□□□□ -2.23
HMCN1Q96RW7 SCARNA17.2-201ENST00000516334 143 ntBASIC1.14□□□□□ -2.23
HMCN1Q96RW7 RNU6-557P-201ENST00000516842 110 ntBASIC1.14□□□□□ -2.23
HMCN1Q96RW7 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.14□□□□□ -2.23
HMCN1Q96RW7 AC023043.2-201ENST00000589678 1026 ntBASIC1.14□□□□□ -2.23
HMCN1Q96RW7 AC025588.3-201ENST00000604182 274 ntBASIC1.14□□□□□ -2.23
HMCN1Q96RW7 SCARNA17.4-201ENST00000614296 143 ntBASIC1.14□□□□□ -2.23
HMCN1Q96RW7 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms