Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NKX2-3Q8TAU0 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-3Q8TAU0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-3Q8TAU0 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-3Q8TAU0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.02□□□□□ -1.61
NKX2-3Q8TAU0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.02□□□□□ -1.61
NKX2-3Q8TAU0 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-3Q8TAU0 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-3Q8TAU0 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC5.02□□□□□ -1.61
NKX2-3Q8TAU0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC5.02□□□□□ -1.61
NKX2-3Q8TAU0 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 SMG1P4-204ENST00000523028 4131 ntBASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 SNORD45.3-201ENST00000363836 72 ntBASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 Y_RNA.219-201ENST00000364232 113 ntBASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 Y_RNA.243-201ENST00000364481 109 ntBASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 RNU1-140P-201ENST00000365040 165 ntBASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 RNA5SP22-201ENST00000365393 109 ntBASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 SNORD18B-201ENST00000365659 72 ntBASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 SNORA18.3-201ENST00000384122 132 ntBASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 SNORD78.1-201ENST00000390866 65 ntBASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 MIR320B2-201ENST00000408479 138 ntBASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 RNU6-855P-201ENST00000410395 104 ntBASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 HMGB1P37-201ENST00000439613 609 ntBASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 AC009237.8-201ENST00000445492 379 ntBASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 RPL23AP14-201ENST00000468281 468 ntBASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 RNU6-1256P-201ENST00000516539 103 ntBASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 RNA5SP291-201ENST00000517222 105 ntBASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 AP004371.1-201ENST00000525240 214 ntBASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 CR383656.8-201ENST00000549046 145 ntBASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-3Q8TAU0 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5□□□□□ -1.61
NKX2-3Q8TAU0 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5□□□□□ -1.61
NKX2-3Q8TAU0 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
NKX2-3Q8TAU0 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NKX2-3Q8TAU0 MTND5P18-201ENST00000445624 1801 ntBASIC5□□□□□ -1.61
NKX2-3Q8TAU0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
NKX2-3Q8TAU0 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
NKX2-3Q8TAU0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NKX2-3Q8TAU0 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
NKX2-3Q8TAU0 AC007919.1-201ENST00000429380 217 ntBASIC5□□□□□ -1.61
NKX2-3Q8TAU0 GOT2P5-201ENST00000433995 546 ntBASIC5□□□□□ -1.61
NKX2-3Q8TAU0 RPS29P7-201ENST00000439662 171 ntBASIC5□□□□□ -1.61
NKX2-3Q8TAU0 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5□□□□□ -1.61
NKX2-3Q8TAU0 SNRPGP8-201ENST00000454064 226 ntBASIC5□□□□□ -1.61
NKX2-3Q8TAU0 RNU6-970P-201ENST00000516312 107 ntBASIC5□□□□□ -1.61
NKX2-3Q8TAU0 RNA5SP73-201ENST00000516744 108 ntBASIC5□□□□□ -1.61
NKX2-3Q8TAU0 AC100770.1-201ENST00000532310 322 ntBASIC5□□□□□ -1.61
NKX2-3Q8TAU0 SNORA51-201ENST00000606420 132 ntBASIC5□□□□□ -1.61
NKX2-3Q8TAU0 MIR7151-201ENST00000617477 60 ntBASIC5□□□□□ -1.61
NKX2-3Q8TAU0 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5□□□□□ -1.61
NKX2-3Q8TAU0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC5□□□□□ -1.61
NKX2-3Q8TAU0 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 SNORD56.1-201ENST00000362913 68 ntBASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 Y_RNA.85-201ENST00000363014 111 ntBASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 RNU6-727P-201ENST00000363592 107 ntBASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 RNU6-335P-201ENST00000364563 113 ntBASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 Z98749.2-208ENST00000381646 500 ntBASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 SNORA9-201ENST00000384215 133 ntBASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 MIR544A-201ENST00000384855 91 ntBASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 AC244670.1-201ENST00000436879 112 ntBASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 SNORD108-201ENST00000459332 71 ntBASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 MLLT10P2-201ENST00000506434 249 ntBASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 AC006445.2-201ENST00000510061 472 ntBASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 RN7SL703P-201ENST00000578485 302 ntBASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 AC025946.2-201ENST00000603398 234 ntBASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 AL359198.2-201ENST00000611836 194 ntBASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 AL442128.1-201ENST00000615151 90 ntBASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.99□□□□□ -1.61
NKX2-3Q8TAU0 AL133383.2-201ENST00000622958 2336 ntBASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 Y_RNA.163-201ENST00000363702 113 ntBASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 RNU6-978P-201ENST00000364371 103 ntBASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 MIR450A2-201ENST00000385022 100 ntBASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 MIR1302-5-201ENST00000408164 150 ntBASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.98□□□□□ -1.61
NKX2-3Q8TAU0 RPL39P40-201ENST00000445481 146 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms