RNA–Protein interactions for RNA: ENST00000390866.1

SNORD78.1-201, Transcript of small nucleolar RNA, C/D box 78, humanhuman

BASIC

Gene SNORD78, Length 65 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD78.1-201ENST00000390866 AEBP2Q6ZN18 517 aaPredicted RBP14.98□□□□□ -0.01
SNORD78.1-201ENST00000390866 CHIC1Q5VXU3 224 aa13.96□□□□□ -0.17
SNORD78.1-201ENST00000390866 POTEDQ86YR6 584 aa13.4□□□□□ -0.26
SNORD78.1-201ENST00000390866 SENP3Q9H4L4 574 aaPredicted RBP12.94□□□□□ -0.34
SNORD78.1-201ENST00000390866 PHF23Q9BUL5 403 aaPredicted RBP12.63□□□□□ -0.39
SNORD78.1-201ENST00000390866 FOXD1Q16676 465 aa12.2□□□□□ -0.46
SNORD78.1-201ENST00000390866 MSH5O43196 834 aa11.82□□□□□ -0.52
SNORD78.1-201ENST00000390866 PIAS4Q8N2W9 510 aaPredicted RBP11.13□□□□□ -0.63
SNORD78.1-201ENST00000390866 CACNB1Q02641 598 aaPredicted RBP10.83□□□□□ -0.68
SNORD78.1-201ENST00000390866 PPP6R1Q9UPN7 881 aa10.58□□□□□ -0.72
SNORD78.1-201ENST00000390866 ADRA2BP18089 450 aa10.49□□□□□ -0.73
SNORD78.1-201ENST00000390866 POTEHQ6S545 545 aa10.28□□□□□ -0.76
SNORD78.1-201ENST00000390866 DMRT2Q9Y5R5 561 aa10.09□□□□□ -0.79
SNORD78.1-201ENST00000390866 PLPPR3Q6T4P5 718 aa10.02□□□□□ -0.81
SNORD78.1-201ENST00000390866 RNF39Q9H2S5 420 aa10□□□□□ -0.81
SNORD78.1-201ENST00000390866 MAPK8IP2Q13387 824 aaPredicted RBP9.96□□□□□ -0.82
SNORD78.1-201ENST00000390866 C1QBPQ07021 282 aaKnown RBP9.78□□□□□ -0.84
SNORD78.1-201ENST00000390866 DCAF8L1A6NGE4 600 aa9.75□□□□□ -0.85
SNORD78.1-201ENST00000390866 SCAF1Q9H7N4 1312 aaKnown RBP9.59□□□□□ -0.87
SNORD78.1-201ENST00000390866 HOXD11P31277 338 aaPredicted RBP9.29□□□□□ -0.92
SNORD78.1-201ENST00000390866 DNAJC5BQ9UF47 199 aa9.18□□□□□ -0.94
SNORD78.1-201ENST00000390866 SP7Q8TDD2 431 aaPredicted RBP9.13□□□□□ -0.95
SNORD78.1-201ENST00000390866 DSG3P32926 999 aa9□□□□□ -0.97
SNORD78.1-201ENST00000390866 PLSCR2Q9NRY7 297 aa8.95□□□□□ -0.98
SNORD78.1-201ENST00000390866 RNF216Q9NWF9 866 aaPredicted RBP8.93□□□□□ -0.98
SNORD78.1-201ENST00000390866 CHRDL2Q6WN34 429 aa8.86□□□□□ -0.99
SNORD78.1-201ENST00000390866 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.86□□□□□ -0.99
SNORD78.1-201ENST00000390866 CAPN15O75808 1086 aa8.79□□□□□ -1
SNORD78.1-201ENST00000390866 SPINK5Q9NQ38 1064 aaPredicted RBP8.76□□□□□ -1.01
SNORD78.1-201ENST00000390866 CNKSR2Q8WXI2 1034 aa8.74□□□□□ -1.01
SNORD78.1-201ENST00000390866 PPP4R3CPQ6ZMV5 832 aa8.65□□□□□ -1.02
SNORD78.1-201ENST00000390866 RBM42Q9BTD8 480 aaKnown RBP8.61□□□□□ -1.03
SNORD78.1-201ENST00000390866 HAX1O00165 279 aa8.57□□□□□ -1.04
SNORD78.1-201ENST00000390866 LHX8Q68G74 356 aa8.55□□□□□ -1.04
SNORD78.1-201ENST00000390866 U3KPZ7 1027 aaPredicted RBP8.55□□□□□ -1.04
SNORD78.1-201ENST00000390866 ABCB7O75027 752 aa8.5□□□□□ -1.05
SNORD78.1-201ENST00000390866 PIP4P2Q8N4L2 257 aa8.42□□□□□ -1.06
SNORD78.1-201ENST00000390866 TRHP20396 242 aaPredicted RBP8.4□□□□□ -1.06
SNORD78.1-201ENST00000390866 EVX2Q03828 476 aa8.38□□□□□ -1.07
SNORD78.1-201ENST00000390866 ZNF219Q9P2Y4 722 aaPredicted RBP8.32□□□□□ -1.08
SNORD78.1-201ENST00000390866 APLP2Q06481 763 aa8.19□□□□□ -1.1
SNORD78.1-201ENST00000390866 FXR2P51116 673 aaKnown RBP eCLIP8.18□□□□□ -1.1
SNORD78.1-201ENST00000390866 AKT1S1Q96B36 256 aa8.18□□□□□ -1.1
SNORD78.1-201ENST00000390866 GABBR2O75899 941 aa8.13□□□□□ -1.11
SNORD78.1-201ENST00000390866 POTEMA6NI47 508 aa8.12□□□□□ -1.11
SNORD78.1-201ENST00000390866 REM2Q8IYK8 340 aaPredicted RBP8.12□□□□□ -1.11
SNORD78.1-201ENST00000390866 POTEGQ6S5H5 508 aa8.05□□□□□ -1.12
SNORD78.1-201ENST00000390866 PITPNM1O00562 1244 aa8.04□□□□□ -1.12
SNORD78.1-201ENST00000390866 PCDH10Q9P2E7 1040 aa8.03□□□□□ -1.12
SNORD78.1-201ENST00000390866 NCBP3Q53F19 620 aaKnown RBP7.99□□□□□ -1.13
SNORD78.1-201ENST00000390866 C19orf67A6NJJ6 358 aa7.96□□□□□ -1.14
SNORD78.1-201ENST00000390866 POTEIP0CG38 1075 aa7.94□□□□□ -1.14
SNORD78.1-201ENST00000390866 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.92□□□□□ -1.14
SNORD78.1-201ENST00000390866 POLA2Q14181 598 aa7.92□□□□□ -1.14
SNORD78.1-201ENST00000390866 HNRNPUL2Q1KMD3 747 aaKnown RBP7.92□□□□□ -1.14
SNORD78.1-201ENST00000390866 NPM3O75607 178 aaKnown RBP7.87□□□□□ -1.15
SNORD78.1-201ENST00000390866 OTUD5Q96G74 571 aa7.85□□□□□ -1.15
SNORD78.1-201ENST00000390866 PRKAR2AP13861 404 aaKnown RBP7.82□□□□□ -1.16
SNORD78.1-201ENST00000390866 SAMD1Q6SPF0 538 aaPredicted RBP7.82□□□□□ -1.16
SNORD78.1-201ENST00000390866 SLC4A2P04920 1241 aa7.8□□□□□ -1.16
SNORD78.1-201ENST00000390866 OSCARQ8IYS5 282 aa7.71□□□□□ -1.18
SNORD78.1-201ENST00000390866 DCBLD2Q96PD2 775 aa7.68□□□□□ -1.18
SNORD78.1-201ENST00000390866 POTEB2H3BUK9 544 aa7.66□□□□□ -1.18
SNORD78.1-201ENST00000390866 ZBTB12Q9Y330 459 aaPredicted RBP7.65□□□□□ -1.18
SNORD78.1-201ENST00000390866 CLCN6P51797 869 aa7.61□□□□□ -1.19
SNORD78.1-201ENST00000390866 LCE2DQ5TA82 110 aaPredicted RBP7.61□□□□□ -1.19
SNORD78.1-201ENST00000390866 FAM163AQ96GL9 167 aaPredicted RBP7.54□□□□□ -1.2
SNORD78.1-201ENST00000390866 CLEC11AQ9Y240 323 aa7.53□□□□□ -1.2
SNORD78.1-201ENST00000390866 CDAN1Q8IWY9 1227 aa7.52□□□□□ -1.21
SNORD78.1-201ENST00000390866 CHADLQ6NUI6 762 aa7.51□□□□□ -1.21
SNORD78.1-201ENST00000390866 CD44P16070 742 aaKnown RBP7.5□□□□□ -1.21
SNORD78.1-201ENST00000390866 SPDYE1Q8NFV5 336 aaPredicted RBP7.47□□□□□ -1.21
SNORD78.1-201ENST00000390866 MMRN1Q13201 1228 aa7.44□□□□□ -1.22
SNORD78.1-201ENST00000390866 POTEJP0CG39 1038 aa7.37□□□□□ -1.23
SNORD78.1-201ENST00000390866 MAMSTRQ6ZN01 415 aa7.37□□□□□ -1.23
SNORD78.1-201ENST00000390866 SPNS2Q8IVW8 549 aa7.35□□□□□ -1.23
SNORD78.1-201ENST00000390866 SPDYE2BA6NHP3 402 aa7.34□□□□□ -1.23
SNORD78.1-201ENST00000390866 SPDYE6P0CI01 402 aa7.34□□□□□ -1.23
SNORD78.1-201ENST00000390866 SPDYE2Q495Y8 402 aa7.34□□□□□ -1.23
SNORD78.1-201ENST00000390866 ZNF579Q8NAF0 562 aaKnown RBP7.33□□□□□ -1.24
SNORD78.1-201ENST00000390866 GALR2O43603 387 aaPredicted RBP7.32□□□□□ -1.24
SNORD78.1-201ENST00000390866 MYCNP04198 464 aaPredicted RBP7.3□□□□□ -1.24
SNORD78.1-201ENST00000390866 PELP1Q8IZL8 1130 aaKnown RBP7.29□□□□□ -1.24
SNORD78.1-201ENST00000390866 FARP1Q9Y4F1 1045 aaPredicted RBP7.28□□□□□ -1.24
SNORD78.1-201ENST00000390866 SCUBE2Q9NQ36 999 aa7.26□□□□□ -1.25
SNORD78.1-201ENST00000390866 PRR29P0C7W0 189 aa7.25□□□□□ -1.25
SNORD78.1-201ENST00000390866 METRNQ9UJH8 293 aa7.24□□□□□ -1.25
SNORD78.1-201ENST00000390866 ZRANB1Q9UGI0 708 aa7.23□□□□□ -1.25
SNORD78.1-201ENST00000390866 ATF5Q9Y2D1 282 aaPredicted RBP7.23□□□□□ -1.25
SNORD78.1-201ENST00000390866 C7P10643 843 aa7.19□□□□□ -1.26
SNORD78.1-201ENST00000390866 SLC39A7Q92504 469 aa7.16□□□□□ -1.26
SNORD78.1-201ENST00000390866 SSUH2Q9Y2M2 353 aa7.12□□□□□ -1.27
SNORD78.1-201ENST00000390866 ST18O60284 1047 aa7.1□□□□□ -1.27
SNORD78.1-201ENST00000390866 ASTLQ6HA08 431 aaPredicted RBP7.1□□□□□ -1.27
SNORD78.1-201ENST00000390866 ZNF692Q9BU19 519 aaPredicted RBP7.09□□□□□ -1.27
SNORD78.1-201ENST00000390866 ATMINO43313 823 aaPredicted RBP7.05□□□□□ -1.28
SNORD78.1-201ENST00000390866 PHF12Q96QT6 1004 aa7.04□□□□□ -1.28
SNORD78.1-201ENST00000390866 FBLN2P98095 1184 aa7.01□□□□□ -1.29
SNORD78.1-201ENST00000390866 POTEFA5A3E0 1075 aa6.97□□□□□ -1.29
SNORD78.1-201ENST00000390866 PABPN1Q86U42 306 aaKnown RBP eCLIP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms