Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 RNA5SP319-201ENST00000362768 119 ntBASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 SNORD115-28-201ENST00000363931 81 ntBASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 RNU11-5P-201ENST00000391216 129 ntBASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 RNA5SP38-201ENST00000410750 119 ntBASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 HMGN2P34-201ENST00000437647 269 ntBASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 AC083899.1-201ENST00000454465 3819 ntBASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 RN7SL51P-201ENST00000468230 285 ntBASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 RPS17P15-201ENST00000475609 349 ntBASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 RNU6-965P-201ENST00000516721 96 ntBASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 AC000068.2-201ENST00000608816 460 ntBASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 AC118658.2-201ENST00000618697 459 ntBASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 U3.53-201ENST00000628922 216 ntBASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 MIR1248-201ENST00000629190 106 ntBASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
LINC00528Q8N1L1 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 Y_RNA.37-201ENST00000362606 108 ntBASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 RNA5SP113-201ENST00000410486 84 ntBASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 RNU6-402P-201ENST00000410678 103 ntBASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 AC009127.1-201ENST00000467090 155 ntBASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 RN7SL583P-201ENST00000475692 287 ntBASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 RN7SL727P-201ENST00000482164 296 ntBASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 SNORD36C-201ENST00000516733 66 ntBASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 RNU6-856P-201ENST00000516959 98 ntBASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 RNA5SP230-201ENST00000517039 122 ntBASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 RNU6-586P-201ENST00000517265 104 ntBASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 MIR4666B-201ENST00000578142 81 ntBASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 MIR4700-201ENST00000578311 74 ntBASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 MIR4660-201ENST00000583549 74 ntBASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 MIR7853-201ENST00000584820 132 ntBASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 RPSAP73-201ENST00000614820 330 ntBASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 AC092435.4-201ENST00000623012 4159 ntBASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
LINC00528Q8N1L1 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 RNU6-832P-201ENST00000363319 107 ntBASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 RNA5SP507-201ENST00000363603 121 ntBASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 Y_RNA.313-201ENST00000365095 103 ntBASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 Y_RNA.440-201ENST00000384120 114 ntBASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 MIR577-201ENST00000385196 96 ntBASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 MIR223-201ENST00000385204 110 ntBASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 RPL21P3-201ENST00000395517 478 ntBASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 AC114755.2-201ENST00000413520 361 ntBASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 AC073261.1-201ENST00000429409 121 ntBASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 FTH1P12-201ENST00000432137 551 ntBASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 TMEM183AP1-205ENST00000432739 290 ntBASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 AC093270.2-201ENST00000486157 792 ntBASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 SNORA4.4-201ENST00000515921 135 ntBASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 RNU7-99P-201ENST00000516271 62 ntBASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 RNU7-128P-201ENST00000517247 62 ntBASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 AC091544.4-201ENST00000555268 342 ntBASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 AC019288.1-201ENST00000557918 224 ntBASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 MIR3618-201ENST00000580330 88 ntBASIC3.6□□□□□ -1.83
LINC00528Q8N1L1 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 273.1 ms