Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 AL365361.1-201ENST00000566942 3481 ntBASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HCN4Q9Y3Q4 AC092593.1-201ENST00000515413 1815 ntBASIC4.46□□□□□ -1.69
HCN4Q9Y3Q4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.69
HCN4Q9Y3Q4 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.46□□□□□ -1.69
HCN4Q9Y3Q4 AC016588.2-201ENST00000632484 3021 ntBASIC4.46□□□□□ -1.69
HCN4Q9Y3Q4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 RNU4-80P-201ENST00000363200 141 ntBASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 Y_RNA.343-201ENST00000365354 112 ntBASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 Y_RNA.498-201ENST00000384460 102 ntBASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 RNU6-1248P-201ENST00000391096 64 ntBASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 RNA5SP239-201ENST00000410218 129 ntBASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 AL160275.2-201ENST00000412010 394 ntBASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 FTH1P6-201ENST00000430768 320 ntBASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 VDAC1P3-201ENST00000434069 851 ntBASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 RPS27AP10-201ENST00000496103 208 ntBASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 U3.45-201ENST00000607547 219 ntBASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 AL021997.2-201ENST00000615674 271 ntBASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 AC004467.1-201ENST00000615678 330 ntBASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 AC140113.4-201ENST00000622087 222 ntBASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 U6.105-201ENST00000637379 88 ntBASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 ADAM3A-203ENST00000461344 2157 ntBASIC4.46□□□□□ -1.7
HCN4Q9Y3Q4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 RNU6-487P-201ENST00000365430 104 ntBASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 RNU6-1130P-201ENST00000365434 107 ntBASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 RNU6-245P-201ENST00000384020 107 ntBASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 Y_RNA.497-201ENST00000384447 98 ntBASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 RNVU1-14-201ENST00000384770 164 ntBASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 SNORD96B-201ENST00000386148 79 ntBASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 RNU6-1199P-201ENST00000411249 104 ntBASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 HMGB1P37-201ENST00000439613 609 ntBASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 RPL39P29-201ENST00000447779 157 ntBASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 HMGN2P10-201ENST00000448085 265 ntBASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 HMGB3P3-201ENST00000510526 400 ntBASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 SUMO2P18-201ENST00000518873 252 ntBASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 AL356575.1-201ENST00000603008 283 ntBASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 MIR6500-201ENST00000622700 86 ntBASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HCN4Q9Y3Q4 AL672167.1-203ENST00000641299 2975 ntBASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 AC007656.2-201ENST00000624902 4547 ntBASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 Y_RNA.7-201ENST00000362352 102 ntBASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 RNA5SP502-201ENST00000362694 119 ntBASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 RNU6-449P-201ENST00000383914 107 ntBASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 SNORD116-18-201ENST00000383961 92 ntBASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 Y_RNA.400-201ENST00000383963 111 ntBASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 MIR195-201ENST00000385194 87 ntBASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 RPL23AP48-201ENST00000406913 488 ntBASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 ELOCP21-201ENST00000412558 336 ntBASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 RPS29P4-201ENST00000414733 161 ntBASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 RAB28P5-201ENST00000427490 651 ntBASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 RPL30P12-201ENST00000474666 353 ntBASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 AL121594.1-201ENST00000475906 575 ntBASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 RPL32P34-201ENST00000486380 400 ntBASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 AC005840.1-201ENST00000498412 377 ntBASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC4.44□□□□□ -1.7
HCN4Q9Y3Q4 AL354798.1-201ENST00000622505 329 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms