RNA–Protein interactions for RNA: ENST00000411249.1

RNU6-1199P-201, Transcript of RNA, U6 small nuclear 1199, pseudogene, humanhuman

BASIC

Gene RNU6-1199P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1199P-201ENST00000411249 AEBP2Q6ZN18 517 aaPredicted RBP13.57□□□□□ -0.24
RNU6-1199P-201ENST00000411249 CHIC1Q5VXU3 224 aa13.02□□□□□ -0.33
RNU6-1199P-201ENST00000411249 SENP3Q9H4L4 574 aaPredicted RBP11.61□□□□□ -0.55
RNU6-1199P-201ENST00000411249 PHF23Q9BUL5 403 aaPredicted RBP11.49□□□□□ -0.57
RNU6-1199P-201ENST00000411249 FOXD1Q16676 465 aa10.79□□□□□ -0.68
RNU6-1199P-201ENST00000411249 PLPPR3Q6T4P5 718 aa10.51□□□□□ -0.73
RNU6-1199P-201ENST00000411249 ADRA2BP18089 450 aa10.2□□□□□ -0.78
RNU6-1199P-201ENST00000411249 PPP6R1Q9UPN7 881 aa10.18□□□□□ -0.78
RNU6-1199P-201ENST00000411249 PIAS4Q8N2W9 510 aaPredicted RBP10.17□□□□□ -0.78
RNU6-1199P-201ENST00000411249 MSH5O43196 834 aa10.07□□□□□ -0.8
RNU6-1199P-201ENST00000411249 POTEDQ86YR6 584 aa9.6□□□□□ -0.87
RNU6-1199P-201ENST00000411249 SCAF1Q9H7N4 1312 aaKnown RBP9.39□□□□□ -0.91
RNU6-1199P-201ENST00000411249 MAPK8IP2Q13387 824 aaPredicted RBP9.34□□□□□ -0.91
RNU6-1199P-201ENST00000411249 PPP4R3CPQ6ZMV5 832 aa9.23□□□□□ -0.93
RNU6-1199P-201ENST00000411249 DMRT2Q9Y5R5 561 aa9.19□□□□□ -0.94
RNU6-1199P-201ENST00000411249 CNKSR2Q8WXI2 1034 aa9.02□□□□□ -0.97
RNU6-1199P-201ENST00000411249 DCAF8L1A6NGE4 600 aa8.99□□□□□ -0.97
RNU6-1199P-201ENST00000411249 NCBP3Q53F19 620 aaKnown RBP8.97□□□□□ -0.97
RNU6-1199P-201ENST00000411249 RNF216Q9NWF9 866 aaPredicted RBP8.89□□□□□ -0.99
RNU6-1199P-201ENST00000411249 HOXD11P31277 338 aaPredicted RBP8.88□□□□□ -0.99
RNU6-1199P-201ENST00000411249 NPM3O75607 178 aaKnown RBP8.76□□□□□ -1.01
RNU6-1199P-201ENST00000411249 KCNA4P22459 653 aa8.72□□□□□ -1.01
RNU6-1199P-201ENST00000411249 CACNB1Q02641 598 aaPredicted RBP8.64□□□□□ -1.03
RNU6-1199P-201ENST00000411249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.61□□□□□ -1.03
RNU6-1199P-201ENST00000411249 RNF39Q9H2S5 420 aa8.57□□□□□ -1.04
RNU6-1199P-201ENST00000411249 DNAJC5BQ9UF47 199 aa8.5□□□□□ -1.05
RNU6-1199P-201ENST00000411249 C1QBPQ07021 282 aaKnown RBP8.48□□□□□ -1.05
RNU6-1199P-201ENST00000411249 U3KPZ7 1027 aaPredicted RBP8.33□□□□□ -1.08
RNU6-1199P-201ENST00000411249 SLC4A2P04920 1241 aa8.3□□□□□ -1.08
RNU6-1199P-201ENST00000411249 SLC4A1APQ9BWU0 796 aaKnown RBP8.3□□□□□ -1.08
RNU6-1199P-201ENST00000411249 CAPN15O75808 1086 aa8.27□□□□□ -1.09
RNU6-1199P-201ENST00000411249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.21□□□□□ -1.1
RNU6-1199P-201ENST00000411249 HNRNPUL2Q1KMD3 747 aaKnown RBP8.21□□□□□ -1.1
RNU6-1199P-201ENST00000411249 SPINK5Q9NQ38 1064 aaPredicted RBP8.21□□□□□ -1.1
RNU6-1199P-201ENST00000411249 APLP2Q06481 763 aa8.2□□□□□ -1.1
RNU6-1199P-201ENST00000411249 TRHP20396 242 aaPredicted RBP8.18□□□□□ -1.1
RNU6-1199P-201ENST00000411249 SAMD1Q6SPF0 538 aaPredicted RBP8.15□□□□□ -1.1
RNU6-1199P-201ENST00000411249 MYCNP04198 464 aaPredicted RBP8.11□□□□□ -1.11
RNU6-1199P-201ENST00000411249 FOXD4L1Q9NU39 408 aa8.09□□□□□ -1.11
RNU6-1199P-201ENST00000411249 ZNF219Q9P2Y4 722 aaPredicted RBP8.09□□□□□ -1.11
RNU6-1199P-201ENST00000411249 DSG3P32926 999 aa8.08□□□□□ -1.12
RNU6-1199P-201ENST00000411249 ABCB7O75027 752 aa8.06□□□□□ -1.12
RNU6-1199P-201ENST00000411249 ZBTB22O15209 634 aa7.96□□□□□ -1.14
RNU6-1199P-201ENST00000411249 POLA2Q14181 598 aa7.95□□□□□ -1.14
RNU6-1199P-201ENST00000411249 ATF5Q9Y2D1 282 aaPredicted RBP7.9□□□□□ -1.14
RNU6-1199P-201ENST00000411249 EHMT2Q96KQ7 1210 aa7.82□□□□□ -1.16
RNU6-1199P-201ENST00000411249 ATXN8OSP0DMR3 200 aa7.81□□□□□ -1.16
RNU6-1199P-201ENST00000411249 RBM42Q9BTD8 480 aaKnown RBP7.76□□□□□ -1.17
RNU6-1199P-201ENST00000411249 ZBTB12Q9Y330 459 aaPredicted RBP7.76□□□□□ -1.17
RNU6-1199P-201ENST00000411249 CSRNP3Q8WYN3 585 aa7.75□□□□□ -1.17
RNU6-1199P-201ENST00000411249 FBLN2P98095 1184 aa7.67□□□□□ -1.18
RNU6-1199P-201ENST00000411249 OSCARQ8IYS5 282 aa7.65□□□□□ -1.18
RNU6-1199P-201ENST00000411249 AKT1S1Q96B36 256 aa7.58□□□□□ -1.2
RNU6-1199P-201ENST00000411249 POTEHQ6S545 545 aa7.57□□□□□ -1.2
RNU6-1199P-201ENST00000411249 CHRDL2Q6WN34 429 aa7.53□□□□□ -1.2
RNU6-1199P-201ENST00000411249 MKRN4PQ13434 485 aaPredicted RBP7.52□□□□□ -1.21
RNU6-1199P-201ENST00000411249 REM2Q8IYK8 340 aaPredicted RBP7.52□□□□□ -1.21
RNU6-1199P-201ENST00000411249 ZNF692Q9BU19 519 aaPredicted RBP7.52□□□□□ -1.21
RNU6-1199P-201ENST00000411249 SPDYE2BA6NHP3 402 aa7.51□□□□□ -1.21
RNU6-1199P-201ENST00000411249 SPDYE6P0CI01 402 aa7.51□□□□□ -1.21
RNU6-1199P-201ENST00000411249 SPDYE2Q495Y8 402 aa7.51□□□□□ -1.21
RNU6-1199P-201ENST00000411249 CLEC11AQ9Y240 323 aa7.44□□□□□ -1.22
RNU6-1199P-201ENST00000411249 PITPNM1O00562 1244 aa7.43□□□□□ -1.22
RNU6-1199P-201ENST00000411249 PABPN1Q86U42 306 aaKnown RBP eCLIP7.38□□□□□ -1.23
RNU6-1199P-201ENST00000411249 SPDYE1Q8NFV5 336 aaPredicted RBP7.38□□□□□ -1.23
RNU6-1199P-201ENST00000411249 SSUH2Q9Y2M2 353 aa7.37□□□□□ -1.23
RNU6-1199P-201ENST00000411249 PIP4P2Q8N4L2 257 aa7.36□□□□□ -1.23
RNU6-1199P-201ENST00000411249 SPDYE4A6NLX3 237 aa7.31□□□□□ -1.24
RNU6-1199P-201ENST00000411249 PRR29P0C7W0 189 aa7.31□□□□□ -1.24
RNU6-1199P-201ENST00000411249 FXR2P51116 673 aaKnown RBP eCLIP7.3□□□□□ -1.24
RNU6-1199P-201ENST00000411249 HAX1O00165 279 aa7.29□□□□□ -1.24
RNU6-1199P-201ENST00000411249 PRKAR2AP13861 404 aaKnown RBP7.28□□□□□ -1.24
RNU6-1199P-201ENST00000411249 CHADLQ6NUI6 762 aa7.23□□□□□ -1.25
RNU6-1199P-201ENST00000411249 STAG3Q9UJ98 1225 aa7.21□□□□□ -1.26
RNU6-1199P-201ENST00000411249 SP7Q8TDD2 431 aaPredicted RBP7.16□□□□□ -1.26
RNU6-1199P-201ENST00000411249 FARP1Q9Y4F1 1045 aaPredicted RBP7.11□□□□□ -1.27
RNU6-1199P-201ENST00000411249 EVX2Q03828 476 aa7.1□□□□□ -1.27
RNU6-1199P-201ENST00000411249 FKBP8Q14318 412 aa7.09□□□□□ -1.27
RNU6-1199P-201ENST00000411249 C19orf67A6NJJ6 358 aa7.07□□□□□ -1.28
RNU6-1199P-201ENST00000411249 CREBZFQ9NS37 354 aa7.06□□□□□ -1.28
RNU6-1199P-201ENST00000411249 CD44P16070 742 aaKnown RBP7.05□□□□□ -1.28
RNU6-1199P-201ENST00000411249 PLEKHG5O94827 1062 aa7.03□□□□□ -1.28
RNU6-1199P-201ENST00000411249 MIER1Q8N108 512 aa7.03□□□□□ -1.28
RNU6-1199P-201ENST00000411249 NPM1P06748 294 aaKnown RBP eCLIP7.02□□□□□ -1.29
RNU6-1199P-201ENST00000411249 PAK3O75914 559 aaPredicted RBP7□□□□□ -1.29
RNU6-1199P-201ENST00000411249 PROM2Q8N271 834 aa7□□□□□ -1.29
RNU6-1199P-201ENST00000411249 ZRANB1Q9UGI0 708 aa7□□□□□ -1.29
RNU6-1199P-201ENST00000411249 PLCD3Q8N3E9 789 aa6.99□□□□□ -1.29
RNU6-1199P-201ENST00000411249 GABBR2O75899 941 aa6.98□□□□□ -1.29
RNU6-1199P-201ENST00000411249 MNX1P50219 401 aaPredicted RBP6.91□□□□□ -1.3
RNU6-1199P-201ENST00000411249 TSPYL2Q9H2G4 693 aaPredicted RBP6.91□□□□□ -1.3
RNU6-1199P-201ENST00000411249 FBXO3Q9UK99 471 aa6.91□□□□□ -1.3
RNU6-1199P-201ENST00000411249 DCBLD2Q96PD2 775 aa6.9□□□□□ -1.3
RNU6-1199P-201ENST00000411249 CLCN6P51797 869 aa6.89□□□□□ -1.31
RNU6-1199P-201ENST00000411249 ZNF579Q8NAF0 562 aaKnown RBP6.88□□□□□ -1.31
RNU6-1199P-201ENST00000411249 PHF12Q96QT6 1004 aa6.88□□□□□ -1.31
RNU6-1199P-201ENST00000411249 ZBTB47Q9UFB7 747 aaPredicted RBP6.88□□□□□ -1.31
RNU6-1199P-201ENST00000411249 KLHL34Q8N239 644 aa6.86□□□□□ -1.31
RNU6-1199P-201ENST00000411249 GALR2O43603 387 aaPredicted RBP6.82□□□□□ -1.32
RNU6-1199P-201ENST00000411249 RASEFQ8IZ41 740 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 499 ms