Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM35Q9UPQ4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM35Q9UPQ4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
TRIM35Q9UPQ4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM35Q9UPQ4 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM35Q9UPQ4 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM35Q9UPQ4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM35Q9UPQ4 AC107068.1-201ENST00000563286 4218 ntBASIC5.82□□□□□ -1.48
TRIM35Q9UPQ4 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM35Q9UPQ4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
TRIM35Q9UPQ4 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
TRIM35Q9UPQ4 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM35Q9UPQ4 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 AC026951.1-201ENST00000559530 2459 ntBASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 RNY4P6-201ENST00000363667 96 ntBASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 MIR1290-201ENST00000408735 78 ntBASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 AL139281.1-201ENST00000422120 335 ntBASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 CKS1BP5-201ENST00000434172 273 ntBASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 AL500522.2-201ENST00000448562 343 ntBASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 AC078817.1-201ENST00000492623 435 ntBASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 RNU2-13P-201ENST00000515909 113 ntBASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 IGLVIV-65-201ENST00000517313 360 ntBASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 IGKV2D-19-201ENST00000523346 262 ntBASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 MIR4277-201ENST00000578298 84 ntBASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 MIR4716-201ENST00000579628 84 ntBASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 AC053481.4-201ENST00000583164 216 ntBASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 AC079587.1-201ENST00000603846 277 ntBASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 MIR378J-201ENST00000611988 109 ntBASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 MIR4662A-201ENST00000637499 67 ntBASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM35Q9UPQ4 AC025031.4-201ENST00000621248 3271 ntBASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 AC118273.1-201ENST00000525324 3006 ntBASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 RNU6-24P-201ENST00000384440 107 ntBASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 MIR3065-201ENST00000390137 79 ntBASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 FTH1P15-201ENST00000406984 280 ntBASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 RNA5SP504-201ENST00000410676 117 ntBASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 AC125238.1-201ENST00000448842 249 ntBASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 RPL23AP54-201ENST00000495129 419 ntBASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 RNA5SP236-201ENST00000516169 116 ntBASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 AL160290.3-201ENST00000604869 165 ntBASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 AL137067.1-201ENST00000615933 120 ntBASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 5S_rRNA.11-201ENST00000618635 84 ntBASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 MIR6810-201ENST00000622701 70 ntBASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 AC091905.2-201ENST00000623143 306 ntBASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM35Q9UPQ4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM35Q9UPQ4 AL592182.3-201ENST00000642132 3304 ntBASIC5.79□□□□□ -1.48
TRIM35Q9UPQ4 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.79□□□□□ -1.48
TRIM35Q9UPQ4 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.79□□□□□ -1.48
TRIM35Q9UPQ4 MIR331-201ENST00000362302 94 ntBASIC5.79□□□□□ -1.48
TRIM35Q9UPQ4 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM35Q9UPQ4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.79□□□□□ -1.48
TRIM35Q9UPQ4 RNU7-116P-201ENST00000516940 62 ntBASIC5.79□□□□□ -1.48
TRIM35Q9UPQ4 RNU1-117P-201ENST00000517041 158 ntBASIC5.79□□□□□ -1.48
TRIM35Q9UPQ4 MIR6134-201ENST00000617606 109 ntBASIC5.79□□□□□ -1.48
TRIM35Q9UPQ4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.79□□□□□ -1.48
TRIM35Q9UPQ4 BMS1P21-201ENST00000634565 365 ntBASIC5.79□□□□□ -1.48
TRIM35Q9UPQ4 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
TRIM35Q9UPQ4 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM35Q9UPQ4 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM35Q9UPQ4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TRIM35Q9UPQ4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TRIM35Q9UPQ4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
TRIM35Q9UPQ4 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM35Q9UPQ4 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.79□□□□□ -1.48
TRIM35Q9UPQ4 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM35Q9UPQ4 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
TRIM35Q9UPQ4 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM35Q9UPQ4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM35Q9UPQ4 SNORD114-7-201ENST00000362520 77 ntBASIC5.78□□□□□ -1.48
TRIM35Q9UPQ4 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM35Q9UPQ4 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TRIM35Q9UPQ4 SNORA74C-2-201ENST00000411179 201 ntBASIC5.78□□□□□ -1.48
TRIM35Q9UPQ4 AC004866.1-201ENST00000411748 78 ntBASIC5.78□□□□□ -1.48
TRIM35Q9UPQ4 AC007064.1-201ENST00000412238 351 ntBASIC5.78□□□□□ -1.48
TRIM35Q9UPQ4 RPS29P17-201ENST00000430795 166 ntBASIC5.78□□□□□ -1.48
TRIM35Q9UPQ4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM35Q9UPQ4 RN7SL98P-201ENST00000462271 300 ntBASIC5.78□□□□□ -1.48
TRIM35Q9UPQ4 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.78□□□□□ -1.48
TRIM35Q9UPQ4 RPL23AP97-201ENST00000568955 471 ntBASIC5.78□□□□□ -1.48
TRIM35Q9UPQ4 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.78□□□□□ -1.48
TRIM35Q9UPQ4 AC105245.1-201ENST00000581934 244 ntBASIC5.78□□□□□ -1.48
TRIM35Q9UPQ4 AC140113.4-201ENST00000622087 222 ntBASIC5.78□□□□□ -1.48
TRIM35Q9UPQ4 AC011944.2-201ENST00000624440 683 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms