Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.4□□□□□ -1.86
PCDHGA7Q9Y5G6 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PCDHGA7Q9Y5G6 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PCDHGA7Q9Y5G6 RNU6-490P-201ENST00000362985 107 ntBASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 RNU6-1141P-201ENST00000364520 107 ntBASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 SNORD42.2-201ENST00000365570 69 ntBASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 CD24P4-201ENST00000382840 243 ntBASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 RNU6-622P-201ENST00000384272 103 ntBASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 MIR544A-201ENST00000384855 91 ntBASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 SNORA48.2-201ENST00000390926 124 ntBASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 RNU6-1304P-201ENST00000411374 106 ntBASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 AC078809.1-201ENST00000427601 140 ntBASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 AP001025.1-201ENST00000486139 332 ntBASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 AP003355.3-201ENST00000623465 114 ntBASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 AC097372.5-201ENST00000623665 376 ntBASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHGA7Q9Y5G6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 ZNF826P-207ENST00000622273 1910 ntBASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 SNORD114-19-201ENST00000363072 75 ntBASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 SNORA63-201ENST00000363450 132 ntBASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 RNU6-1059P-201ENST00000363752 98 ntBASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 Y_RNA.395-201ENST00000383945 109 ntBASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 RNU6-890P-201ENST00000384121 107 ntBASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 ARF4P2-201ENST00000430209 526 ntBASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 AL357552.1-201ENST00000445254 415 ntBASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 AC068781.1-201ENST00000488231 618 ntBASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 RPL22P13-201ENST00000493291 347 ntBASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 RNU6-470P-201ENST00000515954 104 ntBASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 RNU6-1213P-201ENST00000517075 94 ntBASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 MIR5696-201ENST00000578474 85 ntBASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 UCA1.1-201ENST00000620952 75 ntBASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 AC092608.2-201ENST00000624427 218 ntBASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 SCARNA15.3-201ENST00000626315 122 ntBASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 SCARNA4.1-201ENST00000628597 123 ntBASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 ZNF299P-201ENST00000406845 1804 ntBASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA7Q9Y5G6 MAPK10-362ENST00000641864 4484 ntBASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 RNU4-35P-201ENST00000362588 141 ntBASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 RNU6-1010P-201ENST00000362757 107 ntBASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 RNU6-692P-201ENST00000384496 107 ntBASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 RN7SKP111-201ENST00000410349 271 ntBASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 AC138623.1-201ENST00000418060 216 ntBASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 RPL39P29-201ENST00000447779 157 ntBASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 RN7SL594P-201ENST00000470590 287 ntBASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 AC016632.1-201ENST00000503994 196 ntBASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 SCARNA16.2-201ENST00000516520 172 ntBASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 SNORA70.18-201ENST00000516696 98 ntBASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 RPS15AP11-201ENST00000594193 385 ntBASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 RPL23AP78-201ENST00000599928 470 ntBASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 AP000560.1-201ENST00000624150 1937 ntBASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 MTND5P30-201ENST00000452896 1731 ntBASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 MTND4P27-201ENST00000450813 1354 ntBASIC3.38□□□□□ -1.87
PCDHGA7Q9Y5G6 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHGA7Q9Y5G6 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
PCDHGA7Q9Y5G6 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA7Q9Y5G6 AC092268.1-201ENST00000342691 405 ntBASIC3.37□□□□□ -1.87
PCDHGA7Q9Y5G6 Y_RNA.123-201ENST00000363338 102 ntBASIC3.37□□□□□ -1.87
PCDHGA7Q9Y5G6 U3.6-201ENST00000363622 211 ntBASIC3.37□□□□□ -1.87
PCDHGA7Q9Y5G6 RNU6-1083P-201ENST00000384022 107 ntBASIC3.37□□□□□ -1.87
PCDHGA7Q9Y5G6 RNU6-331P-201ENST00000384724 107 ntBASIC3.37□□□□□ -1.87
PCDHGA7Q9Y5G6 MIR128-1-201ENST00000384921 82 ntBASIC3.37□□□□□ -1.87
PCDHGA7Q9Y5G6 MTCYBP2-201ENST00000407745 171 ntBASIC3.37□□□□□ -1.87
PCDHGA7Q9Y5G6 RNA5SP293-201ENST00000410527 113 ntBASIC3.37□□□□□ -1.87
PCDHGA7Q9Y5G6 RN7SKP61-201ENST00000410642 295 ntBASIC3.37□□□□□ -1.87
PCDHGA7Q9Y5G6 AL354751.2-201ENST00000415471 210 ntBASIC3.37□□□□□ -1.87
PCDHGA7Q9Y5G6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA7Q9Y5G6 RPL23AP95-201ENST00000426806 265 ntBASIC3.37□□□□□ -1.87
PCDHGA7Q9Y5G6 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC3.37□□□□□ -1.87
PCDHGA7Q9Y5G6 AL513124.1-201ENST00000450410 614 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms