Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
MS4A3Q96HJ5 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC5.11□□□□□ -1.59
MS4A3Q96HJ5 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
MS4A3Q96HJ5 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
MS4A3Q96HJ5 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
MS4A3Q96HJ5 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 AC104964.3-201ENST00000606115 2860 ntBASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 RNU6-1313P-201ENST00000362622 102 ntBASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 RN7SKP145-201ENST00000363291 303 ntBASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 AL161932.1-201ENST00000437408 146 ntBASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 IFNWP4-201ENST00000453148 294 ntBASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 AC083982.1-201ENST00000485679 344 ntBASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 RNU7-25P-201ENST00000516544 62 ntBASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 RNA5SP271-201ENST00000516700 88 ntBASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 SNORA18.7-201ENST00000516910 131 ntBASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 AL139099.4-201ENST00000614802 114 ntBASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 uc_338.13-201ENST00000618243 179 ntBASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 AP004607.3-201ENST00000530354 3915 ntBASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
MS4A3Q96HJ5 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
MS4A3Q96HJ5 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
MS4A3Q96HJ5 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
MS4A3Q96HJ5 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
MS4A3Q96HJ5 RN7SKP224-201ENST00000364140 325 ntBASIC5.09□□□□□ -1.59
MS4A3Q96HJ5 RN7SKP69-201ENST00000365390 305 ntBASIC5.09□□□□□ -1.59
MS4A3Q96HJ5 SNORA40.18-201ENST00000391200 128 ntBASIC5.09□□□□□ -1.59
MS4A3Q96HJ5 RN7SKP200-201ENST00000410564 320 ntBASIC5.09□□□□□ -1.59
MS4A3Q96HJ5 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.09□□□□□ -1.59
MS4A3Q96HJ5 RNU6-871P-201ENST00000516122 100 ntBASIC5.09□□□□□ -1.59
MS4A3Q96HJ5 RNU6-1073P-201ENST00000517182 106 ntBASIC5.09□□□□□ -1.59
MS4A3Q96HJ5 AC013412.1-201ENST00000610687 192 ntBASIC5.09□□□□□ -1.59
MS4A3Q96HJ5 AP001005.3-201ENST00000622049 129 ntBASIC5.09□□□□□ -1.59
MS4A3Q96HJ5 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.09□□□□□ -1.59
MS4A3Q96HJ5 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.09□□□□□ -1.59
MS4A3Q96HJ5 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
MS4A3Q96HJ5 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
MS4A3Q96HJ5 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
MS4A3Q96HJ5 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
MS4A3Q96HJ5 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
MS4A3Q96HJ5 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
MS4A3Q96HJ5 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
MS4A3Q96HJ5 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.6
MS4A3Q96HJ5 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 AL353796.1-201ENST00000561542 3241 ntBASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 RNU6-1094P-201ENST00000362416 104 ntBASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 SNORD115-37-201ENST00000363768 82 ntBASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 SNORD31B-201ENST00000364977 69 ntBASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 MIR147B-201ENST00000390185 80 ntBASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 RN7SKP16-201ENST00000410180 299 ntBASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 AL035660.1-201ENST00000422041 222 ntBASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 AL445646.1-201ENST00000431784 216 ntBASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 AC084357.1-201ENST00000473404 255 ntBASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 IGKV2-18-201ENST00000522607 343 ntBASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 AC233702.9-201ENST00000581528 203 ntBASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 HMGN2P15-201ENST00000585707 270 ntBASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 AP005431.1-201ENST00000618479 319 ntBASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 AC073308.1-201ENST00000623696 305 ntBASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 AL512310.12-203ENST00000640543 90 ntBASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 AC006504.1-201ENST00000562493 3666 ntBASIC5.08□□□□□ -1.6
MS4A3Q96HJ5 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.07□□□□□ -1.6
MS4A3Q96HJ5 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MS4A3Q96HJ5 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MS4A3Q96HJ5 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MS4A3Q96HJ5 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms