Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC8.29□□□□□ -1.08
SENP3Q9H4L4 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC8.28□□□□□ -1.08
SENP3Q9H4L4 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC8.28□□□□□ -1.08
SENP3Q9H4L4 MFSD8-236ENST00000641509 4050 ntBASIC8.28□□□□□ -1.08
SENP3Q9H4L4 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
SENP3Q9H4L4 AC002546.1-201ENST00000588041 2504 ntBASIC8.28□□□□□ -1.08
SENP3Q9H4L4 AP004607.3-201ENST00000530354 3915 ntBASIC8.28□□□□□ -1.08
SENP3Q9H4L4 RNU1-20P-201ENST00000363314 162 ntBASIC8.28□□□□□ -1.08
SENP3Q9H4L4 AC011753.3-201ENST00000443436 406 ntBASIC8.28□□□□□ -1.08
SENP3Q9H4L4 PTMAP3-201ENST00000447474 330 ntBASIC8.28□□□□□ -1.08
SENP3Q9H4L4 AC112771.1-201ENST00000463581 102 ntBASIC8.28□□□□□ -1.08
SENP3Q9H4L4 SNORD19.2-201ENST00000516978 73 ntBASIC8.28□□□□□ -1.08
SENP3Q9H4L4 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC8.28□□□□□ -1.08
SENP3Q9H4L4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC8.28□□□□□ -1.08
SENP3Q9H4L4 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
SENP3Q9H4L4 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
SENP3Q9H4L4 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC8.27□□□□□ -1.08
SENP3Q9H4L4 AC062029.1-202ENST00000606164 3651 ntBASIC8.27□□□□□ -1.08
SENP3Q9H4L4 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC8.27□□□□□ -1.09
SENP3Q9H4L4 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
SENP3Q9H4L4 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
SENP3Q9H4L4 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SENP3Q9H4L4 AL442644.1-201ENST00000454390 3105 ntBASIC8.27□□□□□ -1.09
SENP3Q9H4L4 RNA5SP319-201ENST00000362768 119 ntBASIC8.27□□□□□ -1.09
SENP3Q9H4L4 RNU1-24P-201ENST00000364285 165 ntBASIC8.27□□□□□ -1.09
SENP3Q9H4L4 RNU1-106P-201ENST00000384382 164 ntBASIC8.27□□□□□ -1.09
SENP3Q9H4L4 MIR206-201ENST00000384872 86 ntBASIC8.27□□□□□ -1.09
SENP3Q9H4L4 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC8.27□□□□□ -1.09
SENP3Q9H4L4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC8.27□□□□□ -1.09
SENP3Q9H4L4 RN7SL352P-201ENST00000466002 277 ntBASIC8.27□□□□□ -1.09
SENP3Q9H4L4 RPS29P22-201ENST00000472363 168 ntBASIC8.27□□□□□ -1.09
SENP3Q9H4L4 AL358944.1-201ENST00000528537 144 ntBASIC8.27□□□□□ -1.09
SENP3Q9H4L4 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC8.27□□□□□ -1.09
SENP3Q9H4L4 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC8.27□□□□□ -1.09
SENP3Q9H4L4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
SENP3Q9H4L4 AC092070.2-203ENST00000598377 3644 ntBASIC8.27□□□□□ -1.09
SENP3Q9H4L4 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
SENP3Q9H4L4 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SENP3Q9H4L4 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SENP3Q9H4L4 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC8.26□□□□□ -1.09
SENP3Q9H4L4 Y_RNA.236-201ENST00000364427 111 ntBASIC8.26□□□□□ -1.09
SENP3Q9H4L4 AC092628.1-201ENST00000436250 252 ntBASIC8.26□□□□□ -1.09
SENP3Q9H4L4 RPS17P15-201ENST00000475609 349 ntBASIC8.26□□□□□ -1.09
SENP3Q9H4L4 RNU2-34P-201ENST00000516534 121 ntBASIC8.26□□□□□ -1.09
SENP3Q9H4L4 AC104964.3-201ENST00000606115 2860 ntBASIC8.26□□□□□ -1.09
SENP3Q9H4L4 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SENP3Q9H4L4 AL161912.2-201ENST00000565707 3007 ntBASIC8.26□□□□□ -1.09
SENP3Q9H4L4 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SENP3Q9H4L4 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
SENP3Q9H4L4 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
SENP3Q9H4L4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC8.26□□□□□ -1.09
SENP3Q9H4L4 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
SENP3Q9H4L4 TTC41P-205ENST00000551270 3963 ntBASIC8.25□□□□□ -1.09
SENP3Q9H4L4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SENP3Q9H4L4 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SENP3Q9H4L4 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC8.25□□□□□ -1.09
SENP3Q9H4L4 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC8.25□□□□□ -1.09
SENP3Q9H4L4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
SENP3Q9H4L4 snoU2-30.1-201ENST00000365012 70 ntBASIC8.25□□□□□ -1.09
SENP3Q9H4L4 RNU6-1319P-201ENST00000390855 104 ntBASIC8.25□□□□□ -1.09
SENP3Q9H4L4 RNU6-747P-201ENST00000390928 104 ntBASIC8.25□□□□□ -1.09
SENP3Q9H4L4 RNU6-241P-201ENST00000391148 104 ntBASIC8.25□□□□□ -1.09
SENP3Q9H4L4 RNU6-177P-201ENST00000411257 104 ntBASIC8.25□□□□□ -1.09
SENP3Q9H4L4 GOT2P5-201ENST00000433995 546 ntBASIC8.25□□□□□ -1.09
SENP3Q9H4L4 RNU6-303P-201ENST00000517091 106 ntBASIC8.25□□□□□ -1.09
SENP3Q9H4L4 Y_RNA.722-201ENST00000517279 114 ntBASIC8.25□□□□□ -1.09
SENP3Q9H4L4 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC8.25□□□□□ -1.09
SENP3Q9H4L4 ATP5J2P6-201ENST00000565203 266 ntBASIC8.25□□□□□ -1.09
SENP3Q9H4L4 MIR5095-201ENST00000578844 88 ntBASIC8.25□□□□□ -1.09
SENP3Q9H4L4 HMGN2P15-201ENST00000585707 270 ntBASIC8.25□□□□□ -1.09
SENP3Q9H4L4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC8.25□□□□□ -1.09
SENP3Q9H4L4 FTO-223ENST00000640179 210 ntTSL 5 BASIC8.25□□□□□ -1.09
SENP3Q9H4L4 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
SENP3Q9H4L4 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
SENP3Q9H4L4 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
SENP3Q9H4L4 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
SENP3Q9H4L4 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
SENP3Q9H4L4 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SENP3Q9H4L4 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
SENP3Q9H4L4 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
SENP3Q9H4L4 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
SENP3Q9H4L4 SNORD68-201ENST00000363214 84 ntBASIC8.24□□□□□ -1.09
SENP3Q9H4L4 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC8.24□□□□□ -1.09
SENP3Q9H4L4 RNU6-341P-201ENST00000516973 96 ntBASIC8.24□□□□□ -1.09
SENP3Q9H4L4 AC012676.2-201ENST00000619258 186 ntBASIC8.24□□□□□ -1.09
SENP3Q9H4L4 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC8.24□□□□□ -1.09
SENP3Q9H4L4 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
SENP3Q9H4L4 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC8.24□□□□□ -1.09
SENP3Q9H4L4 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
SENP3Q9H4L4 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SENP3Q9H4L4 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SENP3Q9H4L4 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
SENP3Q9H4L4 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC8.23□□□□□ -1.09
SENP3Q9H4L4 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SENP3Q9H4L4 AC011266.1-201ENST00000624119 3569 ntBASIC8.23□□□□□ -1.09
SENP3Q9H4L4 RNA5SP131-201ENST00000365452 119 ntBASIC8.23□□□□□ -1.09
SENP3Q9H4L4 HMGA1P8-201ENST00000414130 321 ntBASIC8.23□□□□□ -1.09
SENP3Q9H4L4 AC074348.1-201ENST00000426503 132 ntBASIC8.23□□□□□ -1.09
SENP3Q9H4L4 AC008897.1-201ENST00000494006 347 ntBASIC8.23□□□□□ -1.09
SENP3Q9H4L4 RPPH1-2P-201ENST00000516688 293 ntBASIC8.23□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 201.4 ms