Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.63□□□□□ -1.67
HPS1Q92902 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HPS1Q92902 AC126755.2-208ENST00000327792 462 ntBASIC4.63□□□□□ -1.67
HPS1Q92902 AC138969.1-213ENST00000331436 462 ntBASIC4.63□□□□□ -1.67
HPS1Q92902 RNA5SP507-201ENST00000363603 121 ntBASIC4.63□□□□□ -1.67
HPS1Q92902 RNU6-978P-201ENST00000364371 103 ntBASIC4.63□□□□□ -1.67
HPS1Q92902 SNORD18B-201ENST00000365659 72 ntBASIC4.63□□□□□ -1.67
HPS1Q92902 RNU6-820P-201ENST00000384273 107 ntBASIC4.63□□□□□ -1.67
HPS1Q92902 MIR549A-201ENST00000385268 96 ntBASIC4.63□□□□□ -1.67
HPS1Q92902 MIR1290-201ENST00000408735 78 ntBASIC4.63□□□□□ -1.67
HPS1Q92902 RNU6-383P-201ENST00000410864 94 ntBASIC4.63□□□□□ -1.67
HPS1Q92902 Y_RNA.622-201ENST00000411091 108 ntBASIC4.63□□□□□ -1.67
HPS1Q92902 RPL23AP27-201ENST00000415161 451 ntBASIC4.63□□□□□ -1.67
HPS1Q92902 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.63□□□□□ -1.67
HPS1Q92902 AURKAPS2-201ENST00000454983 333 ntBASIC4.63□□□□□ -1.67
HPS1Q92902 AC006445.2-201ENST00000510061 472 ntBASIC4.63□□□□□ -1.67
HPS1Q92902 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.63□□□□□ -1.67
HPS1Q92902 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.63□□□□□ -1.67
HPS1Q92902 RNU6-65P-201ENST00000516332 98 ntBASIC4.63□□□□□ -1.67
HPS1Q92902 Y_RNA.690-201ENST00000516603 95 ntBASIC4.63□□□□□ -1.67
HPS1Q92902 RNU6-107P-201ENST00000516643 102 ntBASIC4.63□□□□□ -1.67
HPS1Q92902 HMGN2P6-201ENST00000551091 273 ntBASIC4.63□□□□□ -1.67
HPS1Q92902 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC4.63□□□□□ -1.67
HPS1Q92902 RPSAP73-201ENST00000614820 330 ntBASIC4.63□□□□□ -1.67
HPS1Q92902 AC118658.2-201ENST00000618697 459 ntBASIC4.63□□□□□ -1.67
HPS1Q92902 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.63□□□□□ -1.67
HPS1Q92902 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HPS1Q92902 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
HPS1Q92902 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HPS1Q92902 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.63□□□□□ -1.67
HPS1Q92902 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.63□□□□□ -1.67
HPS1Q92902 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HPS1Q92902 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HPS1Q92902 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HPS1Q92902 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.62□□□□□ -1.67
HPS1Q92902 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HPS1Q92902 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HPS1Q92902 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HPS1Q92902 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HPS1Q92902 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HPS1Q92902 RN7SKP104-201ENST00000362605 328 ntBASIC4.62□□□□□ -1.67
HPS1Q92902 Y_RNA.415-201ENST00000384012 112 ntBASIC4.62□□□□□ -1.67
HPS1Q92902 SNORA48.5-201ENST00000391143 135 ntBASIC4.62□□□□□ -1.67
HPS1Q92902 AL590762.2-201ENST00000395798 571 ntBASIC4.62□□□□□ -1.67
HPS1Q92902 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
HPS1Q92902 AL133270.1-201ENST00000402635 279 ntBASIC4.62□□□□□ -1.67
HPS1Q92902 RN7SKP213-201ENST00000410746 298 ntBASIC4.62□□□□□ -1.67
HPS1Q92902 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.62□□□□□ -1.67
HPS1Q92902 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.62□□□□□ -1.67
HPS1Q92902 RPL26P9-201ENST00000457466 433 ntBASIC4.62□□□□□ -1.67
HPS1Q92902 RPL31P41-201ENST00000477967 372 ntBASIC4.62□□□□□ -1.67
HPS1Q92902 AC006517.1-201ENST00000480485 328 ntBASIC4.62□□□□□ -1.67
HPS1Q92902 MLLT10P2-201ENST00000506434 249 ntBASIC4.62□□□□□ -1.67
HPS1Q92902 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.62□□□□□ -1.67
HPS1Q92902 SNRPGP20-201ENST00000604477 205 ntBASIC4.62□□□□□ -1.67
HPS1Q92902 AL672167.1-203ENST00000641299 2975 ntBASIC4.62□□□□□ -1.67
HPS1Q92902 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
HPS1Q92902 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.62□□□□□ -1.67
HPS1Q92902 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.62□□□□□ -1.67
HPS1Q92902 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
HPS1Q92902 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.62□□□□□ -1.67
HPS1Q92902 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.62□□□□□ -1.67
HPS1Q92902 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HPS1Q92902 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HPS1Q92902 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HPS1Q92902 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HPS1Q92902 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HPS1Q92902 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
HPS1Q92902 AC107068.1-201ENST00000563286 4218 ntBASIC4.61□□□□□ -1.67
HPS1Q92902 AC118273.1-201ENST00000525324 3006 ntBASIC4.61□□□□□ -1.67
HPS1Q92902 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.61□□□□□ -1.67
HPS1Q92902 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HPS1Q92902 Y_RNA.85-201ENST00000363014 111 ntBASIC4.61□□□□□ -1.67
HPS1Q92902 Y_RNA.163-201ENST00000363702 113 ntBASIC4.61□□□□□ -1.67
HPS1Q92902 RNA5SP335-201ENST00000363817 110 ntBASIC4.61□□□□□ -1.67
HPS1Q92902 Y_RNA.361-201ENST00000365515 120 ntBASIC4.61□□□□□ -1.67
HPS1Q92902 SNORA51.5-201ENST00000384126 131 ntBASIC4.61□□□□□ -1.67
HPS1Q92902 SNORD78.1-201ENST00000390866 65 ntBASIC4.61□□□□□ -1.67
HPS1Q92902 RN7SKP216-201ENST00000411050 312 ntBASIC4.61□□□□□ -1.67
HPS1Q92902 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.61□□□□□ -1.67
HPS1Q92902 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.61□□□□□ -1.67
HPS1Q92902 RPL39P40-201ENST00000445481 146 ntBASIC4.61□□□□□ -1.67
HPS1Q92902 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HPS1Q92902 RNU6-970P-201ENST00000516312 107 ntBASIC4.61□□□□□ -1.67
HPS1Q92902 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.61□□□□□ -1.67
HPS1Q92902 AC126177.5-201ENST00000549599 178 ntBASIC4.61□□□□□ -1.67
HPS1Q92902 RN7SL356P-201ENST00000582228 248 ntBASIC4.61□□□□□ -1.67
HPS1Q92902 ARF4P1-201ENST00000605447 541 ntBASIC4.61□□□□□ -1.67
HPS1Q92902 AC000068.2-201ENST00000608816 460 ntBASIC4.61□□□□□ -1.67
HPS1Q92902 AL442128.1-201ENST00000615151 90 ntBASIC4.61□□□□□ -1.67
HPS1Q92902 AC109583.2-201ENST00000617367 129 ntBASIC4.61□□□□□ -1.67
HPS1Q92902 AC068870.2-201ENST00000620635 389 ntBASIC4.61□□□□□ -1.67
HPS1Q92902 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
HPS1Q92902 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.61□□□□□ -1.67
HPS1Q92902 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.61□□□□□ -1.67
HPS1Q92902 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HPS1Q92902 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HPS1Q92902 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HPS1Q92902 AL592182.3-201ENST00000642132 3304 ntBASIC4.61□□□□□ -1.67
HPS1Q92902 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms