Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.92■□□□□ 0.62
USH1CQ9Y6N9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
USH1CQ9Y6N9 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
USH1CQ9Y6N9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.92■□□□□ 0.62
USH1CQ9Y6N9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.92■□□□□ 0.62
USH1CQ9Y6N9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USH1CQ9Y6N9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USH1CQ9Y6N9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 ANO7L1-203ENST00000602586 1720 ntBASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
USH1CQ9Y6N9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 KRT18P11-201ENST00000435214 1283 ntBASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 CNN2P6-201ENST00000439038 900 ntBASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USH1CQ9Y6N9 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
USH1CQ9Y6N9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.89■□□□□ 0.62
USH1CQ9Y6N9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
USH1CQ9Y6N9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
USH1CQ9Y6N9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
USH1CQ9Y6N9 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
USH1CQ9Y6N9 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
USH1CQ9Y6N9 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
USH1CQ9Y6N9 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
USH1CQ9Y6N9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
USH1CQ9Y6N9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms