Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.34■□□□□ 0.85
SNX9Q9Y5X1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
SNX9Q9Y5X1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNX9Q9Y5X1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SNX9Q9Y5X1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SNX9Q9Y5X1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.33■□□□□ 0.85
SNX9Q9Y5X1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SNX9Q9Y5X1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.33■□□□□ 0.85
SNX9Q9Y5X1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SNX9Q9Y5X1 AC005521.1-201ENST00000393351 872 ntBASIC20.33■□□□□ 0.85
SNX9Q9Y5X1 RCN1P1-201ENST00000400413 996 ntBASIC20.33■□□□□ 0.85
SNX9Q9Y5X1 AP003041.3-201ENST00000527151 707 ntBASIC20.33■□□□□ 0.85
SNX9Q9Y5X1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
SNX9Q9Y5X1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.33■□□□□ 0.85
SNX9Q9Y5X1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SNX9Q9Y5X1 AC010653.2-201ENST00000623505 997 ntBASIC20.33■□□□□ 0.85
SNX9Q9Y5X1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNX9Q9Y5X1 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.33■□□□□ 0.84
SNX9Q9Y5X1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.33■□□□□ 0.84
SNX9Q9Y5X1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
SNX9Q9Y5X1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
SNX9Q9Y5X1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNX9Q9Y5X1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SNX9Q9Y5X1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SNX9Q9Y5X1 FEM1AP3-201ENST00000403722 1741 ntBASIC20.33■□□□□ 0.84
SNX9Q9Y5X1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.33■□□□□ 0.84
SNX9Q9Y5X1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNX9Q9Y5X1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX9Q9Y5X1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX9Q9Y5X1 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX9Q9Y5X1 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.32■□□□□ 0.84
SNX9Q9Y5X1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SNX9Q9Y5X1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.32■□□□□ 0.84
SNX9Q9Y5X1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX9Q9Y5X1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX9Q9Y5X1 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.32■□□□□ 0.84
SNX9Q9Y5X1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.32■□□□□ 0.84
SNX9Q9Y5X1 AL137013.1-201ENST00000432946 1228 ntBASIC20.32■□□□□ 0.84
SNX9Q9Y5X1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.32■□□□□ 0.84
SNX9Q9Y5X1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SNX9Q9Y5X1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SNX9Q9Y5X1 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
SNX9Q9Y5X1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.32■□□□□ 0.84
SNX9Q9Y5X1 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.32■□□□□ 0.84
SNX9Q9Y5X1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX9Q9Y5X1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.32■□□□□ 0.84
SNX9Q9Y5X1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SNX9Q9Y5X1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 TERF1P1-201ENST00000311003 1181 ntBASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 HMGA1P5-201ENST00000412453 271 ntBASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 FAM210CP-201ENST00000445714 574 ntBASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 AC010203.1-204ENST00000548782 407 ntBASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX9Q9Y5X1 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 FP475955.4-201ENST00000623131 1990 ntBASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX9Q9Y5X1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.29■□□□□ 0.84
SNX9Q9Y5X1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms