Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 KRT18P48-201ENST00000434763 852 ntBASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDHGA9Q9Y5G4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 AC026471.1-201ENST00000564629 3026 ntBASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 AL441883.1-201ENST00000566170 1045 ntBASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PCDHGA9Q9Y5G4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 AP003041.3-201ENST00000527151 707 ntBASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 AL023973.1-201ENST00000624619 620 ntBASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PCDHGA9Q9Y5G4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 AL359075.1-203ENST00000462729 1002 ntBASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 PRSS44-201ENST00000515154 1146 ntBASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.73■□□□□ 0.43
PCDHGA9Q9Y5G4 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms