Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 SIRPAP1-201ENST00000448467 1770 ntBASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGB1Q9Y5G3 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 CROCCP5-201ENST00000436658 830 ntBASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 C2orf69P4-201ENST00000565394 541 ntBASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 AL589743.5-201ENST00000616611 1050 ntBASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PCDHGB1Q9Y5G3 AC018553.1-201ENST00000616682 1458 ntBASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 AC069236.1-201ENST00000604339 616 ntBASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.37■□□□□ 0.37
PCDHGB1Q9Y5G3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PCDHGB1Q9Y5G3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms