Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 PMS2P7-201ENST00000506558 1336 ntBASIC17.96■□□□□ 0.46
LHX6Q9UPM6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
LHX6Q9UPM6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
LHX6Q9UPM6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.95■□□□□ 0.46
LHX6Q9UPM6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LHX6Q9UPM6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LHX6Q9UPM6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LHX6Q9UPM6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC17.95■□□□□ 0.46
LHX6Q9UPM6 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.95■□□□□ 0.46
LHX6Q9UPM6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
LHX6Q9UPM6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
LHX6Q9UPM6 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
LHX6Q9UPM6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LHX6Q9UPM6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LHX6Q9UPM6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.95■□□□□ 0.46
LHX6Q9UPM6 SLC25A1P1-201ENST00000528351 927 ntBASIC17.95■□□□□ 0.46
LHX6Q9UPM6 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.95■□□□□ 0.46
LHX6Q9UPM6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.95■□□□□ 0.46
LHX6Q9UPM6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
LHX6Q9UPM6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.95■□□□□ 0.46
LHX6Q9UPM6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
LHX6Q9UPM6 AC116351.2-201ENST00000606540 1585 ntBASIC17.95■□□□□ 0.46
LHX6Q9UPM6 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LHX6Q9UPM6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.95■□□□□ 0.46
LHX6Q9UPM6 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
LHX6Q9UPM6 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
LHX6Q9UPM6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 TERC-201ENST00000602385 541 ntBASIC17.94■□□□□ 0.46
LHX6Q9UPM6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
LHX6Q9UPM6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 DPP3P2-201ENST00000416030 1696 ntBASIC17.93■□□□□ 0.46
LHX6Q9UPM6 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 CHCHD2P8-201ENST00000429873 447 ntBASIC17.93■□□□□ 0.46
LHX6Q9UPM6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 KRT16P4-201ENST00000453883 522 ntBASIC17.93■□□□□ 0.46
LHX6Q9UPM6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 AP001005.1-201ENST00000571755 1248 ntBASIC17.93■□□□□ 0.46
LHX6Q9UPM6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 AC140113.2-201ENST00000604370 208 ntBASIC17.93■□□□□ 0.46
LHX6Q9UPM6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
LHX6Q9UPM6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms