Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
COPS3Q9UNS2 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
COPS3Q9UNS2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 NCF1B-203ENST00000435988 1254 ntBASIC16.92■□□□□ 0.3
COPS3Q9UNS2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.92■□□□□ 0.3
COPS3Q9UNS2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 MIR4758-201ENST00000577688 71 ntBASIC16.92■□□□□ 0.3
COPS3Q9UNS2 AC083880.1-201ENST00000608266 535 ntBASIC16.92■□□□□ 0.3
COPS3Q9UNS2 AL121829.2-201ENST00000620908 328 ntBASIC16.92■□□□□ 0.3
COPS3Q9UNS2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
COPS3Q9UNS2 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 SOX15-203ENST00000570788 1093 ntBASIC16.91■□□□□ 0.3
COPS3Q9UNS2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 AC018470.1-201ENST00000624790 3129 ntBASIC16.91■□□□□ 0.3
COPS3Q9UNS2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.91■□□□□ 0.3
COPS3Q9UNS2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 ANO7L1-203ENST00000602586 1720 ntBASIC16.9■□□□□ 0.3
COPS3Q9UNS2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
COPS3Q9UNS2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms