Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.33■□□□□ 0.85
SIX4Q9UIU6 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
SIX4Q9UIU6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SIX4Q9UIU6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SIX4Q9UIU6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SIX4Q9UIU6 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
SIX4Q9UIU6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
SIX4Q9UIU6 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.32■□□□□ 0.84
SIX4Q9UIU6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SIX4Q9UIU6 AL512353.2-201ENST00000448759 1962 ntBASIC20.32■□□□□ 0.84
SIX4Q9UIU6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SIX4Q9UIU6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIX4Q9UIU6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIX4Q9UIU6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIX4Q9UIU6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.31■□□□□ 0.84
SIX4Q9UIU6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIX4Q9UIU6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIX4Q9UIU6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.31■□□□□ 0.84
SIX4Q9UIU6 AL023284.2-201ENST00000405850 579 ntBASIC20.31■□□□□ 0.84
SIX4Q9UIU6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SIX4Q9UIU6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
SIX4Q9UIU6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIX4Q9UIU6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.31■□□□□ 0.84
SIX4Q9UIU6 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SIX4Q9UIU6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
SIX4Q9UIU6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SIX4Q9UIU6 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SIX4Q9UIU6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SIX4Q9UIU6 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.3■□□□□ 0.84
SIX4Q9UIU6 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 KRT8P45-201ENST00000414328 1447 ntBASIC20.3■□□□□ 0.84
SIX4Q9UIU6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SIX4Q9UIU6 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.29■□□□□ 0.84
SIX4Q9UIU6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIX4Q9UIU6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIX4Q9UIU6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SIX4Q9UIU6 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.29■□□□□ 0.84
SIX4Q9UIU6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIX4Q9UIU6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SIX4Q9UIU6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.29■□□□□ 0.84
SIX4Q9UIU6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIX4Q9UIU6 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIX4Q9UIU6 KRT18P57-201ENST00000443599 1254 ntBASIC20.29■□□□□ 0.84
SIX4Q9UIU6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.29■□□□□ 0.84
SIX4Q9UIU6 AL138966.2-201ENST00000621997 464 ntBASIC20.29■□□□□ 0.84
SIX4Q9UIU6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SIX4Q9UIU6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SIX4Q9UIU6 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.29■□□□□ 0.84
SIX4Q9UIU6 KRT8P32-201ENST00000512863 1461 ntBASIC20.29■□□□□ 0.84
SIX4Q9UIU6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIX4Q9UIU6 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.28■□□□□ 0.84
SIX4Q9UIU6 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SIX4Q9UIU6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SIX4Q9UIU6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SIX4Q9UIU6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.28■□□□□ 0.84
SIX4Q9UIU6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SIX4Q9UIU6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SIX4Q9UIU6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms