Protein–RNA interactions for Protein: Q9UHL9

GTF2IRD1, General transcription factor II-I repeat domain-containing protein 1, humanhuman

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1Q9UHL9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
GTF2IRD1Q9UHL9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF2IRD1Q9UHL9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
GTF2IRD1Q9UHL9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
GTF2IRD1Q9UHL9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
GTF2IRD1Q9UHL9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
GTF2IRD1Q9UHL9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
GTF2IRD1Q9UHL9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
GTF2IRD1Q9UHL9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.91■□□□□ 0.94
GTF2IRD1Q9UHL9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
GTF2IRD1Q9UHL9 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
GTF2IRD1Q9UHL9 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
GTF2IRD1Q9UHL9 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.91■□□□□ 0.94
GTF2IRD1Q9UHL9 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC20.91■□□□□ 0.94
GTF2IRD1Q9UHL9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.91■□□□□ 0.94
GTF2IRD1Q9UHL9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.91■□□□□ 0.94
GTF2IRD1Q9UHL9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.91■□□□□ 0.94
GTF2IRD1Q9UHL9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
GTF2IRD1Q9UHL9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
GTF2IRD1Q9UHL9 AC092119.3-201ENST00000612618 583 ntBASIC20.91■□□□□ 0.94
GTF2IRD1Q9UHL9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 AC026396.1-201ENST00000419388 421 ntBASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 SEC1P-202ENST00000473944 940 ntBASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
GTF2IRD1Q9UHL9 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.89■□□□□ 0.94
GTF2IRD1Q9UHL9 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.89■□□□□ 0.94
GTF2IRD1Q9UHL9 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.89■□□□□ 0.94
GTF2IRD1Q9UHL9 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
GTF2IRD1Q9UHL9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.89■□□□□ 0.94
GTF2IRD1Q9UHL9 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
GTF2IRD1Q9UHL9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GTF2IRD1Q9UHL9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GTF2IRD1Q9UHL9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GTF2IRD1Q9UHL9 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.89■□□□□ 0.93
GTF2IRD1Q9UHL9 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.89■□□□□ 0.93
GTF2IRD1Q9UHL9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.89■□□□□ 0.93
GTF2IRD1Q9UHL9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC20.89■□□□□ 0.93
GTF2IRD1Q9UHL9 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.89■□□□□ 0.93
GTF2IRD1Q9UHL9 AC011498.5-201ENST00000592027 486 ntBASIC20.89■□□□□ 0.93
GTF2IRD1Q9UHL9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GTF2IRD1Q9UHL9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GTF2IRD1Q9UHL9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.89■□□□□ 0.93
GTF2IRD1Q9UHL9 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
GTF2IRD1Q9UHL9 AC112907.3-201ENST00000577781 2400 ntBASIC20.89■□□□□ 0.93
GTF2IRD1Q9UHL9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
GTF2IRD1Q9UHL9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
GTF2IRD1Q9UHL9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 PKD1P6-201ENST00000343738 4769 ntBASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GTF2IRD1Q9UHL9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
GTF2IRD1Q9UHL9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.87■□□□□ 0.93
GTF2IRD1Q9UHL9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms