Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 KRT8P45-201ENST00000414328 1447 ntBASIC17.44■□□□□ 0.38
LRFN1Q9P244 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN1Q9P244 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN1Q9P244 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN1Q9P244 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN1Q9P244 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LRFN1Q9P244 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN1Q9P244 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN1Q9P244 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN1Q9P244 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.43■□□□□ 0.38
LRFN1Q9P244 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.43■□□□□ 0.38
LRFN1Q9P244 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN1Q9P244 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN1Q9P244 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN1Q9P244 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.43■□□□□ 0.38
LRFN1Q9P244 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN1Q9P244 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN1Q9P244 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN1Q9P244 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN1Q9P244 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN1Q9P244 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.43■□□□□ 0.38
LRFN1Q9P244 AC092647.4-201ENST00000457211 535 ntBASIC17.43■□□□□ 0.38
LRFN1Q9P244 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.43■□□□□ 0.38
LRFN1Q9P244 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN1Q9P244 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.43■□□□□ 0.38
LRFN1Q9P244 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN1Q9P244 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.43■□□□□ 0.38
LRFN1Q9P244 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN1Q9P244 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN1Q9P244 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.43■□□□□ 0.38
LRFN1Q9P244 TREX1-205ENST00000625293 1783 ntBASIC17.43■□□□□ 0.38
LRFN1Q9P244 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LRFN1Q9P244 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LRFN1Q9P244 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.42■□□□□ 0.38
LRFN1Q9P244 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.42■□□□□ 0.38
LRFN1Q9P244 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LRFN1Q9P244 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
LRFN1Q9P244 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.42■□□□□ 0.38
LRFN1Q9P244 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.42■□□□□ 0.38
LRFN1Q9P244 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.42■□□□□ 0.38
LRFN1Q9P244 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.42■□□□□ 0.38
LRFN1Q9P244 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
LRFN1Q9P244 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LRFN1Q9P244 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.42■□□□□ 0.38
LRFN1Q9P244 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 AC011558.1-201ENST00000623459 338 ntBASIC17.42■□□□□ 0.38
LRFN1Q9P244 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.42■□□□□ 0.38
LRFN1Q9P244 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.42■□□□□ 0.38
LRFN1Q9P244 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
LRFN1Q9P244 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LRFN1Q9P244 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LRFN1Q9P244 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
LRFN1Q9P244 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRFN1Q9P244 Z82202.1-201ENST00000623446 1880 ntBASIC17.41■□□□□ 0.38
LRFN1Q9P244 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN1Q9P244 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LRFN1Q9P244 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.41■□□□□ 0.38
LRFN1Q9P244 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.41■□□□□ 0.38
LRFN1Q9P244 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN1Q9P244 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.41■□□□□ 0.38
LRFN1Q9P244 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN1Q9P244 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN1Q9P244 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN1Q9P244 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN1Q9P244 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
LRFN1Q9P244 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN1Q9P244 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN1Q9P244 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.41■□□□□ 0.38
LRFN1Q9P244 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN1Q9P244 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.41■□□□□ 0.38
LRFN1Q9P244 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN1Q9P244 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN1Q9P244 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.41■□□□□ 0.38
LRFN1Q9P244 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN1Q9P244 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
LRFN1Q9P244 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRFN1Q9P244 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
LRFN1Q9P244 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms