Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
KCNIP1Q9NZI2 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 AL049812.1-201ENST00000432563 2267 ntBASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 KRT17P3-201ENST00000420566 1262 ntBASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 UNC93B5-201ENST00000530315 699 ntBASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KCNIP1Q9NZI2 NBPF21P-201ENST00000425093 1451 ntBASIC15.96■□□□□ 0.14
KCNIP1Q9NZI2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
KCNIP1Q9NZI2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
KCNIP1Q9NZI2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
KCNIP1Q9NZI2 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
KCNIP1Q9NZI2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
KCNIP1Q9NZI2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.96■□□□□ 0.14
KCNIP1Q9NZI2 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
KCNIP1Q9NZI2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 CROCCP1-201ENST00000426910 5675 ntBASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 AC006333.2-201ENST00000607957 2099 ntBASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KCNIP1Q9NZI2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
KCNIP1Q9NZI2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
KCNIP1Q9NZI2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.94■□□□□ 0.14
KCNIP1Q9NZI2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
KCNIP1Q9NZI2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.94■□□□□ 0.14
KCNIP1Q9NZI2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
KCNIP1Q9NZI2 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KCNIP1Q9NZI2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
KCNIP1Q9NZI2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
KCNIP1Q9NZI2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KCNIP1Q9NZI2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
KCNIP1Q9NZI2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
KCNIP1Q9NZI2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
KCNIP1Q9NZI2 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC15.94■□□□□ 0.14
KCNIP1Q9NZI2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
KCNIP1Q9NZI2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms