Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.38■□□□□ 0.53
NDE1Q9NXR1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 AC142381.2-201ENST00000566120 298 ntBASIC18.38■□□□□ 0.53
NDE1Q9NXR1 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 AC083906.6-201ENST00000641366 219 ntBASIC18.38■□□□□ 0.53
NDE1Q9NXR1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 TFP1-202ENST00000475455 1573 ntBASIC18.38■□□□□ 0.53
NDE1Q9NXR1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.38■□□□□ 0.53
NDE1Q9NXR1 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.37■□□□□ 0.53
NDE1Q9NXR1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDE1Q9NXR1 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 AC104417.2-201ENST00000562989 1793 ntBASIC18.36■□□□□ 0.53
NDE1Q9NXR1 C2orf69P4-201ENST00000565394 541 ntBASIC18.36■□□□□ 0.53
NDE1Q9NXR1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NDE1Q9NXR1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 AC009053.2-201ENST00000563701 2365 ntBASIC18.35■□□□□ 0.53
NDE1Q9NXR1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 FEM1AP3-201ENST00000403722 1741 ntBASIC18.35■□□□□ 0.53
NDE1Q9NXR1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.35■□□□□ 0.53
NDE1Q9NXR1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms