Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.71■□□□□ 0.43
RLIMQ9NVW2 AL023875.1-201ENST00000640777 796 ntBASIC17.71■□□□□ 0.43
RLIMQ9NVW2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.71■□□□□ 0.43
RLIMQ9NVW2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RLIMQ9NVW2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RLIMQ9NVW2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
RLIMQ9NVW2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RLIMQ9NVW2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RLIMQ9NVW2 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RLIMQ9NVW2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RLIMQ9NVW2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.71■□□□□ 0.43
RLIMQ9NVW2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RLIMQ9NVW2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.71■□□□□ 0.42
RLIMQ9NVW2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 AC093525.10-201ENST00000625130 1569 ntBASIC17.7■□□□□ 0.42
RLIMQ9NVW2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 AL133373.2-201ENST00000623187 2828 ntBASIC17.7■□□□□ 0.42
RLIMQ9NVW2 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 IRX1P1-201ENST00000438849 1838 ntBASIC17.7■□□□□ 0.42
RLIMQ9NVW2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RLIMQ9NVW2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 Z98044.1-201ENST00000632503 1764 ntBASIC17.69■□□□□ 0.42
RLIMQ9NVW2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 AL512353.2-201ENST00000448759 1962 ntBASIC17.69■□□□□ 0.42
RLIMQ9NVW2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RLIMQ9NVW2 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.68■□□□□ 0.42
RLIMQ9NVW2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms