Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 NAPSB-206ENST00000562112 1266 ntBASIC17.88■□□□□ 0.45
KLHL1Q9NR64 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 AC131212.4-201ENST00000623606 975 ntBASIC17.88■□□□□ 0.45
KLHL1Q9NR64 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 LINC01568-207ENST00000641790 1380 ntBASIC17.88■□□□□ 0.45
KLHL1Q9NR64 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 CYP2D8P-201ENST00000433633 1490 ntBASIC17.88■□□□□ 0.45
KLHL1Q9NR64 FSCN1P1-201ENST00000568912 1481 ntBASIC17.88■□□□□ 0.45
KLHL1Q9NR64 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
KLHL1Q9NR64 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL1Q9NR64 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.87■□□□□ 0.45
KLHL1Q9NR64 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL1Q9NR64 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.87■□□□□ 0.45
KLHL1Q9NR64 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL1Q9NR64 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL1Q9NR64 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL1Q9NR64 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.87■□□□□ 0.45
KLHL1Q9NR64 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.87■□□□□ 0.45
KLHL1Q9NR64 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.87■□□□□ 0.45
KLHL1Q9NR64 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.87■□□□□ 0.45
KLHL1Q9NR64 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL1Q9NR64 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL1Q9NR64 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL1Q9NR64 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
KLHL1Q9NR64 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL1Q9NR64 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL1Q9NR64 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL1Q9NR64 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL1Q9NR64 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
KLHL1Q9NR64 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 BX323043.1-201ENST00000641006 1765 ntBASIC17.86■□□□□ 0.45
KLHL1Q9NR64 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 TMPOP1-202ENST00000424642 1267 ntBASIC17.86■□□□□ 0.45
KLHL1Q9NR64 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 FITM1-202ENST00000559294 800 ntBASIC17.86■□□□□ 0.45
KLHL1Q9NR64 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 RN7SL850P-201ENST00000579959 291 ntBASIC17.86■□□□□ 0.45
KLHL1Q9NR64 AC145285.6-201ENST00000604632 637 ntBASIC17.86■□□□□ 0.45
KLHL1Q9NR64 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 HTR7P1-202ENST00000624664 4411 ntBASIC17.86■□□□□ 0.45
KLHL1Q9NR64 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
KLHL1Q9NR64 AP000974.1-201ENST00000623909 2387 ntBASIC17.86■□□□□ 0.45
KLHL1Q9NR64 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 AC004980.1-204ENST00000429707 299 ntBASIC17.85■□□□□ 0.45
KLHL1Q9NR64 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 B3GAT3P1-201ENST00000471720 806 ntBASIC17.85■□□□□ 0.45
KLHL1Q9NR64 AC011506.1-201ENST00000474329 610 ntBASIC17.85■□□□□ 0.45
KLHL1Q9NR64 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 AC026271.3-201ENST00000571884 352 ntBASIC17.85■□□□□ 0.45
KLHL1Q9NR64 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 AC005363.2-201ENST00000618631 242 ntBASIC17.85■□□□□ 0.45
KLHL1Q9NR64 TREX1-205ENST00000625293 1783 ntBASIC17.85■□□□□ 0.45
KLHL1Q9NR64 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
KLHL1Q9NR64 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms