Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN3Q9NQS3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN3Q9NQS3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.21■□□□□ 0.51
NECTIN3Q9NQS3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN3Q9NQS3 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN3Q9NQS3 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.21■□□□□ 0.51
NECTIN3Q9NQS3 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.21■□□□□ 0.51
NECTIN3Q9NQS3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.21■□□□□ 0.51
NECTIN3Q9NQS3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.21■□□□□ 0.51
NECTIN3Q9NQS3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
NECTIN3Q9NQS3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.21■□□□□ 0.51
NECTIN3Q9NQS3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN3Q9NQS3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN3Q9NQS3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN3Q9NQS3 KRT16P1-201ENST00000399124 1418 ntBASIC18.21■□□□□ 0.51
NECTIN3Q9NQS3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN3Q9NQS3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN3Q9NQS3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NECTIN3Q9NQS3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
NECTIN3Q9NQS3 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 LINC01465-201ENST00000408887 1940 ntBASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NECTIN3Q9NQS3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 AC004980.1-204ENST00000429707 299 ntBASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 AC026471.5-201ENST00000615068 467 ntBASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 AC079598.2-202ENST00000546624 1451 ntBASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NECTIN3Q9NQS3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 AL049812.1-201ENST00000432563 2267 ntBASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NECTIN3Q9NQS3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.17■□□□□ 0.5
NECTIN3Q9NQS3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms