Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDH9Q9HC56 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDH9Q9HC56 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.64■□□□□ 0.73
PCDH9Q9HC56 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDH9Q9HC56 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDH9Q9HC56 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH9Q9HC56 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH9Q9HC56 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
PCDH9Q9HC56 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH9Q9HC56 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.64■□□□□ 0.73
PCDH9Q9HC56 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
PCDH9Q9HC56 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH9Q9HC56 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDH9Q9HC56 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
PCDH9Q9HC56 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH9Q9HC56 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH9Q9HC56 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH9Q9HC56 AC104581.1-202ENST00000635932 2618 ntBASIC19.64■□□□□ 0.73
PCDH9Q9HC56 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH9Q9HC56 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH9Q9HC56 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH9Q9HC56 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH9Q9HC56 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH9Q9HC56 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PCDH9Q9HC56 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDH9Q9HC56 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH9Q9HC56 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDH9Q9HC56 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDH9Q9HC56 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
PCDH9Q9HC56 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH9Q9HC56 UBE2SP1-201ENST00000450587 669 ntBASIC19.63■□□□□ 0.73
PCDH9Q9HC56 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH9Q9HC56 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDH9Q9HC56 AC083906.6-201ENST00000641366 219 ntBASIC19.63■□□□□ 0.73
PCDH9Q9HC56 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH9Q9HC56 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PCDH9Q9HC56 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PCDH9Q9HC56 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDH9Q9HC56 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 AIRN-201ENST00000601203 4374 ntBASIC19.62■□□□□ 0.73
PCDH9Q9HC56 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PCDH9Q9HC56 AC090164.3-201ENST00000610780 2143 ntBASIC19.61■□□□□ 0.73
PCDH9Q9HC56 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 HTR7P1-201ENST00000538670 1336 ntBASIC19.61■□□□□ 0.73
PCDH9Q9HC56 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PCDH9Q9HC56 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH9Q9HC56 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH9Q9HC56 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PCDH9Q9HC56 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH9Q9HC56 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
PCDH9Q9HC56 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PCDH9Q9HC56 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH9Q9HC56 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PCDH9Q9HC56 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH9Q9HC56 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDH9Q9HC56 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDH9Q9HC56 TSPY21P-201ENST00000433481 731 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms