Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM38AQ9H6F2 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM38AQ9H6F2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.7■□□□□ 0.42
TMEM38AQ9H6F2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM38AQ9H6F2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM38AQ9H6F2 AC073592.3-201ENST00000625118 1834 ntBASIC17.7■□□□□ 0.42
TMEM38AQ9H6F2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM38AQ9H6F2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM38AQ9H6F2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM38AQ9H6F2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM38AQ9H6F2 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM38AQ9H6F2 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM38AQ9H6F2 AC007613.1-201ENST00000572811 2597 ntBASIC17.69■□□□□ 0.42
TMEM38AQ9H6F2 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TMEM38AQ9H6F2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM38AQ9H6F2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.69■□□□□ 0.42
TMEM38AQ9H6F2 MTDHP1-201ENST00000605323 784 ntBASIC17.69■□□□□ 0.42
TMEM38AQ9H6F2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM38AQ9H6F2 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM38AQ9H6F2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM38AQ9H6F2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM38AQ9H6F2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM38AQ9H6F2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM38AQ9H6F2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM38AQ9H6F2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TMEM38AQ9H6F2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM38AQ9H6F2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM38AQ9H6F2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TMEM38AQ9H6F2 HEIH-201ENST00000623091 1652 ntBASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 KRT17P3-201ENST00000420566 1262 ntBASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 AP003097.1-201ENST00000530657 1135 ntBASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM38AQ9H6F2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.66■□□□□ 0.42
TMEM38AQ9H6F2 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM38AQ9H6F2 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM38AQ9H6F2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.66■□□□□ 0.42
TMEM38AQ9H6F2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TMEM38AQ9H6F2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM38AQ9H6F2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM38AQ9H6F2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM38AQ9H6F2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.66■□□□□ 0.42
TMEM38AQ9H6F2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM38AQ9H6F2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM38AQ9H6F2 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.66■□□□□ 0.42
TMEM38AQ9H6F2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM38AQ9H6F2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.66■□□□□ 0.42
TMEM38AQ9H6F2 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.66■□□□□ 0.42
TMEM38AQ9H6F2 AC069544.1-201ENST00000609399 999 ntBASIC17.66■□□□□ 0.42
TMEM38AQ9H6F2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TMEM38AQ9H6F2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms