Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDT1Q9H211 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.58■□□□□ 0.89
CDT1Q9H211 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.58■□□□□ 0.89
CDT1Q9H211 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDT1Q9H211 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDT1Q9H211 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.58■□□□□ 0.89
CDT1Q9H211 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.58■□□□□ 0.89
CDT1Q9H211 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDT1Q9H211 BX664615.1-201ENST00000443558 458 ntBASIC20.58■□□□□ 0.89
CDT1Q9H211 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDT1Q9H211 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDT1Q9H211 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDT1Q9H211 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.58■□□□□ 0.89
CDT1Q9H211 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.58■□□□□ 0.89
CDT1Q9H211 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.58■□□□□ 0.88
CDT1Q9H211 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CDT1Q9H211 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDT1Q9H211 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.58■□□□□ 0.88
CDT1Q9H211 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CDT1Q9H211 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.58■□□□□ 0.88
CDT1Q9H211 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.58■□□□□ 0.88
CDT1Q9H211 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDT1Q9H211 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDT1Q9H211 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.58■□□□□ 0.88
CDT1Q9H211 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDT1Q9H211 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CDT1Q9H211 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.57■□□□□ 0.88
CDT1Q9H211 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CDT1Q9H211 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDT1Q9H211 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
CDT1Q9H211 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDT1Q9H211 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.57■□□□□ 0.88
CDT1Q9H211 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDT1Q9H211 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDT1Q9H211 AC117947.1-201ENST00000427448 529 ntBASIC20.57■□□□□ 0.88
CDT1Q9H211 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
CDT1Q9H211 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CDT1Q9H211 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.57■□□□□ 0.88
CDT1Q9H211 AL512604.3-201ENST00000569583 964 ntBASIC20.57■□□□□ 0.88
CDT1Q9H211 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDT1Q9H211 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDT1Q9H211 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CDT1Q9H211 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDT1Q9H211 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDT1Q9H211 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDT1Q9H211 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDT1Q9H211 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDT1Q9H211 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDT1Q9H211 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDT1Q9H211 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDT1Q9H211 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDT1Q9H211 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDT1Q9H211 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.56■□□□□ 0.88
CDT1Q9H211 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CDT1Q9H211 DUX4L26-201ENST00000489078 1255 ntBASIC20.56■□□□□ 0.88
CDT1Q9H211 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.56■□□□□ 0.88
CDT1Q9H211 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDT1Q9H211 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.56■□□□□ 0.88
CDT1Q9H211 AC139887.4-201ENST00000607877 719 ntBASIC20.56■□□□□ 0.88
CDT1Q9H211 CR769767.2-201ENST00000622735 460 ntBASIC20.56■□□□□ 0.88
CDT1Q9H211 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDT1Q9H211 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDT1Q9H211 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
CDT1Q9H211 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDT1Q9H211 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.56■□□□□ 0.88
CDT1Q9H211 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDT1Q9H211 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDT1Q9H211 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.56■□□□□ 0.88
CDT1Q9H211 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CDT1Q9H211 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.56■□□□□ 0.88
CDT1Q9H211 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDT1Q9H211 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDT1Q9H211 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CDT1Q9H211 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDT1Q9H211 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDT1Q9H211 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDT1Q9H211 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDT1Q9H211 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDT1Q9H211 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDT1Q9H211 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDT1Q9H211 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDT1Q9H211 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDT1Q9H211 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CDT1Q9H211 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.55■□□□□ 0.88
CDT1Q9H211 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.55■□□□□ 0.88
CDT1Q9H211 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.55■□□□□ 0.88
CDT1Q9H211 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDT1Q9H211 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.55■□□□□ 0.88
CDT1Q9H211 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CDT1Q9H211 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDT1Q9H211 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDT1Q9H211 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CDT1Q9H211 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDT1Q9H211 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.55■□□□□ 0.88
CDT1Q9H211 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDT1Q9H211 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDT1Q9H211 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDT1Q9H211 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDT1Q9H211 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDT1Q9H211 AL512353.2-201ENST00000448759 1962 ntBASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms